MidgeBase gene description page [Pn.06973]
Outline
| Gene ID | Pn.06973 |
| Type | Protein coding gene |
| Scaffold | PnScaf6207 |
| Start | 364 |
| End | 9455 |
| Direction | + |
Sequence
Transcript: 1584 (bp)
ATGGAGGATTACGACGAATTAGCACTTTTATTGGCGACCAGCGACGTCAAGCGAGAGCTTCCCTTTGATCTGCTCAACTTACAGACGCAGAAGGTCCTCGACCTGCAAATGGGCGACTTCGAGCACGTCGTCAATCGTCTGCGCGCGACTTTTCGCAGCGGAAAGACCAAGGACCTGAAGTACCGGCGAAAGCAGTTGGAGGCGCTCCTCCGGCTTTACGAGGAGAATCACGAGCAGATAATAAATGCTCTGGCCGCCGACTTGGGCCGACCAAAGCATGAAGCAATAATTTTCGAAATCGACGTGATGACAAACGAGCTGCTCGAACTGATTGCCCATCTCGACGAATGGGCTGCTCCAGTCAAGCCCTCGAAAGGAATCGCCAACATGCTCGACACTGTGACAGTATTTAAGGAGCCCTACGGCGTTGCCCTCGTCATCGGCGCATGGAACTACCCTCTGCAGCTGTCGCTGGTGCCAATGGCCGGAGCCATAGCTGCTGGCAATTGCGTCATTCTCAAGCCCAGCGAAATTTCAGTGCATTGCGCAAAATTTATCGCCGAAACGTTTCCGAAGTACCTGGACAGTGACGCCTATCAGATAATCAACGGAGGCATCGAAGAGACGACTGCACTGCTCAAGCATCAGTTCGACTACATCTTCTACACGGGCTCGAACCGAGTCGGCCAGATCGTGCATGCTGCGGCCAACAAGTTTCTCACGCCGGTGACGCTGGAGTTGGGCGGAAAGTCGCCCTGCTATGTCGACAGCTCAGTGGATCTCAGCAGGGCTCTCAAGCGCATCATGTGGGGCAAGAACAGTAACGCTGGGCAGACCTGTATAGCGCCCGACTACATTCTCTGCACCAAGGATCTTGAGGCGCGATTTGTCGAGGAGTTTAAGGCTGTGATGCAAGAGTGGTATGGCGACGATCCGCAAAAGAGCCCCGATTTTGGGCGAATCGCTACTGATGGAAATTTTAAACGCCTTGTGACATTCCTGAATTGCGGGACGATAGCAGCCGGCGGCAAATTCGACCCGACCGAGCGTTATCTCGAGCCGACACTGCTCACGAACGTCAGTCAAGACGATCCAATTATGCGTGAGGAGATTTTCGGCCCGATTTTGCCGATCATCAATGTCCATGACGTTCTCGACGCCATCGATTTCATTAATGCCCGCGACAAGCCGCTCTCGCTCTACATTTTCACCAACAACGGCAAGGACCGAGACCTCATACTCAATAATACGTCGGCAGGAACGGTTTGCGTCAATGACACCGTGACTCAGTTCGCTTGCAATATTCCATTTGGTGGTGTTGGTGCGAGCGGTATGGGCGCATATCATGGCAAATACAATTTCGACACATTTACCCACGAAAAGGGGTGCTTAGAAAAGTCGATGGGATTTATGACGGAAAAGCTTGGATGCGCTCGCTACCCGCCCTACACAGATGGCAAAGTTTCGTATCTCACTATCATGATGAGGAAGCGAAAATTCTGGAAAATTCCATTTTTCTCGCAAATAGTCGCCTTTGCACTCGGTGCAGTTGCGAGCTACTACCTTAAGAAACTCTATTTCGAC
Protein: 528 (aa)
MEDYDELALLLATSDVKRELPFDLLNLQTQKVLDLQMGDFEHVVNRLRATFRSGKTKDLKYRRKQLEALLRLYEENHEQIINALAADLGRPKHEAIIFEIDVMTNELLELIAHLDEWAAPVKPSKGIANMLDTVTVFKEPYGVALVIGAWNYPLQLSLVPMAGAIAAGNCVILKPSEISVHCAKFIAETFPKYLDSDAYQIINGGIEETTALLKHQFDYIFYTGSNRVGQIVHAAANKFLTPVTLELGGKSPCYVDSSVDLSRALKRIMWGKNSNAGQTCIAPDYILCTKDLEARFVEEFKAVMQEWYGDDPQKSPDFGRIATDGNFKRLVTFLNCGTIAAGGKFDPTERYLEPTLLTNVSQDDPIMREEIFGPILPIINVHDVLDAIDFINARDKPLSLYIFTNNGKDRDLILNNTSAGTVCVNDTVTQFACNIPFGGVGASGMGAYHGKYNFDTFTHEKGCLEKSMGFMTEKLGCARYPPYTDGKVSYLTIMMRKRKFWKIPFFSQIVAFALGAVASYYLKKLYFD
| Type | Start | End | Length |
| CDS |
364 |
399 |
36 |
| CDS |
6567 |
6796 |
230 |
| CDS |
6945 |
7044 |
100 |
| CDS |
7458 |
7533 |
76 |
| CDS |
7593 |
7738 |
146 |
| CDS |
7995 |
8389 |
395 |
| CDS |
8452 |
8767 |
316 |
| CDS |
8995 |
9125 |
131 |
| CDS |
9299 |
9452 |
154 |
| intron |
400 |
6566 |
6167 |
| intron |
6797 |
6944 |
148 |
| intron |
7045 |
7457 |
413 |
| intron |
7534 |
7592 |
59 |
| intron |
7739 |
7994 |
256 |
| intron |
8390 |
8451 |
62 |
| intron |
8768 |
8994 |
227 |
| intron |
9126 |
9298 |
173 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADY17770 |
RE08771p [Drosophila melanogaster] |
1e-169 |
| InterPro |
IPR016161 |
Aldehyde/histidinol dehydrogenase |
|
| InterPro |
IPR015590 |
Aldehyde dehydrogenase domain |
|
| InterPro |
IPR016162 |
Aldehyde dehydrogenase, N-terminal |
|
| InterPro |
IPR012394 |
Aldehyde dehydrogenase NAD(P)-dependent |
|
| InterPro |
IPR016160 |
Aldehyde dehydrogenase, conserved site |
|
| InterPro |
IPR016163 |
Aldehyde dehydrogenase, C-terminal |
|
| Gene Ontology(BP) |
GO:0006081 |
cellular aldehyde metabolic process |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0004030 |
aldehyde dehydrogenase [NAD(P)+] activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00171.17 |
Aldehyde dehydrogenase family |
1.3e-88 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL012162 |
| A. gambiae |
AGAP005124 |
| H. sapiens |
ENSP00000388369 |
| C. quinquefasciatus |
CPIJ002285 |
| P. humanus |
PHUM593980-PA |
| H. sapiens |
ENSP00000461916 |
| A. aegypti |
AAEL009664 |
| C. quinquefasciatus |
CPIJ002286 |
| D. plexippus |
DPOGS215931PA |
| M. musculus |
ENSMUSG00000019102 |
| H. sapiens |
ENSP00000255084 |
| M. musculus |
ENSMUSG00000010025 |
| P. vanderplanki |
Pv.06918 |
| P. vanderplanki |
Pv.03683 |
| B. mori |
BGIBMGA001966-TA |
| T. castaneum |
TC005623 |
| H. sapiens |
ENSP00000225740 |
| S. invicta |
SI2.2.0_08837 |
| D. melanogaster |
FBgn0010548 |
| A. mellifera |
GB12681-PA |
| H. sapiens |
ENSP00000431595 |
| H. melpomene |
HMEL004160-PA |
| T. castaneum |
TC005624 |
| B. mori |
BGIBMGA001965-TA |
| H. sapiens |
ENSP00000460482 |
| H. sapiens |
ENSP00000378923 |
| N. vitripennis |
NV16074-PA |
| T. castaneum |
TC015979 |
| T. castaneum |
TC005625 |
| H. sapiens |
ENSP00000378942 |
| H. sapiens |
ENSP00000176643 |
| H. sapiens |
ENSP00000389766 |
| H. sapiens |
ENSP00000388469 |
| H. sapiens |
ENSP00000411821 |
| M. musculus |
ENSMUSG00000024885 |
| H. sapiens |
ENSP00000463637 |
| M. musculus |
ENSMUSG00000075296 |
| H. sapiens |
ENSP00000345774 |
| H. sapiens |
ENSP00000464153 |
| T. castaneum |
TC015978 |
| H. sapiens |
ENSP00000434685 |