MidgeBase gene description page [Pn.06929]
Outline
| Gene ID | Pn.06929 |
| Type | Protein coding gene |
| Scaffold | PnScaf6110 |
| Start | 4414 |
| End | 5100 |
| Direction | + |
Sequence
Transcript: 480 (bp)
ATGCTGCAGCTTTCGGGGCAAATCACGGATTGGGTGATCATGAAAGGATTTTTGACGAAGCTGCAAGCAAGACGAGGCTTCCCGTGCACAACCTTCCTCATGGACATGACATTCATCATGCTGGCTGCCTTCCTCGCTCACCCGGTGCTGTCCATTGTGCTCATCACAATGGGCGTCGCAGCTTCGTCATTCATTTATGCAAATGCCTTCGTCAATGTCATCGAAATCGCGCCGCGATTTTCCGCCATCACTTATGCCGTCTCCAATACTTTTGCCACAATTGCTGGGATGATTTCACCGCTTGTGACTGGATTCATCGTGGTCGATGGGAGCGAATTCCAGTGGAAAATTGCTCTCGGTCTCGGCGCATTCTTCTACTTGATCGGCTCGATAACTTACTGGCTTTGTGTGCGAGTGGAAGTTCAACCGTGGGCAGAAATAAAAGACGAGGAAGATAATAAGAAGACGTCGACTTATCTT
Protein: 160 (aa)
MLQLSGQITDWVIMKGFLTKLQARRGFPCTTFLMDMTFIMLAAFLAHPVLSIVLITMGVAASSFIYANAFVNVIEIAPRFSAITYAVSNTFATIAGMISPLVTGFIVVDGSEFQWKIALGLGAFFYLIGSITYWLCVRVEVQPWAEIKDEEDNKKTSTYL
| Type | Start | End | Length |
| CDS |
4414 |
4743 |
330 |
| CDS |
4888 |
4924 |
37 |
| CDS |
4985 |
5097 |
113 |
| intron |
4744 |
4887 |
144 |
| intron |
4925 |
4984 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002053996 |
GJ24194 [Drosophila virilis] gb|EDW67516.1| GJ24194 [Drosophila virilis] |
8e-28 |
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Pfam |
PF07151.7 |
Protein of unknown function (DUF1391) |
0.055 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
6e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes