MidgeBase gene description page [Pn.06840]
Outline
| Gene ID | Pn.06840 |
| Type | Protein coding gene |
| Scaffold | PnScaf6051 |
| Start | 75766 |
| End | 77010 |
| Direction | + |
Sequence
Transcript: 657 (bp)
ATGTCAAAGTCTGCAAATGCAAAAATGGGCTTTTTAAATGCTCTGAATATTCTTCATAAAACGAAAATGTTCGGCAGAAATAAAAGTGAACCACTGTGGAAAGTTTTCAGAAAGCACCCCGTAACGCGTGGAATGGCATCTTACCTGCTCATCTGGCCGACGGGAAATATTATTCAACAGACGTTGTGCAGCGACACATACGATTGGTGGAAAGTTGTGCGATTTGGTCTTTATGGCTGCTTTATAACGGCTCCCAGCTTATATTGTTGGGTGAAACTAGCAACTTTCATGTACCCAAATAACAATTTGAGACTGGCAATGGCGAAAGCTATTATCGAACAAATTTCTTACACGCCGCTCGCAATGTGCACTTTCTTCTACAGTATGACCTGGCTTGAGACTTTCTCAGCAGCAGAAGCTTGGGAAGAGGTCAAAACGAAGTTCCCACCCACCTACTTCACGGCCATTACAATCTGGCCTCTAATAGGAACAGTCAATTTTGCATTCATTCCCGAAAGAAATCGCGTCTTCTTCGTTTCATGCTTTTCATTATTGTGGACAATCTACTTAGCTCATATAAAGAATATGCAACGTGATAAGATGCTCTTGGAGAAAGCGCAGCAAGAATCAAAAGAGCTCTCGACCACGAAAGACAAA
Protein: 219 (aa)
MSKSANAKMGFLNALNILHKTKMFGRNKSEPLWKVFRKHPVTRGMASYLLIWPTGNIIQQTLCSDTYDWWKVVRFGLYGCFITAPSLYCWVKLATFMYPNNNLRLAMAKAIIEQISYTPLAMCTFFYSMTWLETFSAAEAWEEVKTKFPPTYFTAITIWPLIGTVNFAFIPERNRVFFVSCFSLLWTIYLAHIKNMQRDKMLLEKAQQESKELSTTKDK
| Type | Start | End | Length |
| CDS |
75766 |
76046 |
281 |
| CDS |
76123 |
76168 |
46 |
| CDS |
76232 |
76475 |
244 |
| CDS |
76922 |
77007 |
86 |
| intron |
76047 |
76122 |
76 |
| intron |
76169 |
76231 |
63 |
| intron |
76476 |
76921 |
446 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001844750 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS38210.1| conserved hypothetical protein [Culex quinquefasciatus] |
3e-48 |
| InterPro |
IPR007248 |
Mpv17/PMP22 |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF04117.7 |
Mpv17 / PMP22 family |
6.6e-20 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ003162 |
| D. melanogaster |
FBgn0029580 |
| P. vanderplanki |
Pv.09935 |
| B. mori |
BGIBMGA010703-TA |
| D. melanogaster |
FBgn0026872 |
| T. castaneum |
TC011649 |
| P. humanus |
PHUM369630-PA |
| D. plexippus |
DPOGS206106PA |
| A. gambiae |
AGAP010066 |
| H. melpomene |
HMEL005041-PA |
| A. aegypti |
AAEL001601 |
| D. plexippus |
DPOGS206777PA |
| P. vanderplanki |
Pv.09934 |
| C. quinquefasciatus |
CPIJ003163 |
| A. aegypti |
AAEL001625 |
| A. mellifera |
GB17105-PA |
| S. invicta |
SI2.2.0_14437 |
| N. vitripennis |
NV13076-PA |
| H. melpomene |
HMEL006179-PA |