MidgeBase gene description page [Pn.06827]
Outline
| Gene ID | Pn.06827 |
| Type | Protein coding gene |
| Scaffold | PnScaf6045 |
| Start | 44222 |
| End | 45975 |
| Direction | - |
Sequence
Transcript: 1392 (bp)
ATGTCAAAACAGATTGTAAAAGAAGACGGCAGATATGTCATAATTCAGGACGGTCGCTCCATTCCACTGAAAGTGATGAATGTACAGAAAGAAGTTCCCGAGCCGAAGAAGTATGTTGTGAAAACGAGCTCAGGTCAAGTTATTTCGGTGACATCGCCAACATCAGTAAAACTCGAAAAGCCCTCAACGTCGACCGGACTCAGAACAATCGGTCCAGCATCCGCCATCACAATTGGCGGCCGAAAATCAGCAGGAGAATCCAGCGGGAATGTCATCAAAATCGTCTCGCCCACCTCGCCGTCAACGAGCGGGAACGTGAAGGTTGTGCGAGTCATGAGCAGCGCAGGAGGCACAACTCAGAAAATCATTCAAGTACAAAAGCCACAATCGGCGCCGCGAATTCTGAATCAAACGTGGAGTCATTCAGAAGTAAAGCAAGAGCCCGCGCAATCTCGTGCAATCACGGTCATTCGCAAATCGGACGGCACTGAGCCGCCAGCGAAAAAGACAAAGTATATCACACTGACCTCATCGCAAATTAGTCAAATCGAAGGAGCGACAATTATCAATGACGGCGACAAGAAGAGAGTCATGTTGCCGACAAATTATCGGGAGCAGCTTGAGAAACTGAATGTCACAGCATCGCCGACGAAGACCAGCGGTCAAGTCTTCAAGATCGTCCAGGAGGTAAAGAAGCCAGCTCTTGAAATCGATCCGCTCGACATGAATCGCTCGTATCCGGGCATGAAGAAGCCAAAGAGACCATGCAACTGCACAAAGTCACAATGCTTGAAGTTCTATTGCGATTGTTTTGCGGCGGGCGAATATTGCGTTGGTTGTAATTGCAAGGACTGTCTCAACGAACATGACACGGAAGAACGCGAGAAGGCCGTCAAATTGTGCATGGAGCGAAATCCGTTTGCGTTCAAATCAAAAGAAGCTACTGAAGAGCAACAACGATTGCATCAACGCGGTTGCAATTGTAAGAGATCCGGTTGTCTGAAAAACTATTGCGAGTGTTACGAAGCAAAAATTTCTTGTTCCGCAAACTGTCGTTGCTTGGGCTGCAAAAACGTTGACGACATTGACGAGAAGATGGAAATGGAGTTGCAATACCTGAAGCAGTGCGGAAAGCGAGGACAATTCAGTGAAGAAATCTATGAGAAGAACCTTGCGGCGCTAAAGAAAGTCACCGATTTGAATGAGCTGGTGAAGAAACCGTACAACTTTATGACTCAAGACGTTATCGAAGCGACAGTTCAGTGCATGATCGCACAGGCGGAAGAGTGCGAGAAGATGAGCGTGTCAAAGAAGGAGGGAGAGCGAATGATTCTCGAAGAGTTTAGTCGATGCCTGCAGGAGATTATAGAATTCTCAGCGAAAAATGTCGAC
Protein: 464 (aa)
MSKQIVKEDGRYVIIQDGRSIPLKVMNVQKEVPEPKKYVVKTSSGQVISVTSPTSVKLEKPSTSTGLRTIGPASAITIGGRKSAGESSGNVIKIVSPTSPSTSGNVKVVRVMSSAGGTTQKIIQVQKPQSAPRILNQTWSHSEVKQEPAQSRAITVIRKSDGTEPPAKKTKYITLTSSQISQIEGATIINDGDKKRVMLPTNYREQLEKLNVTASPTKTSGQVFKIVQEVKKPALEIDPLDMNRSYPGMKKPKRPCNCTKSQCLKFYCDCFAAGEYCVGCNCKDCLNEHDTEEREKAVKLCMERNPFAFKSKEATEEQQRLHQRGCNCKRSGCLKNYCECYEAKISCSANCRCLGCKNVDDIDEKMEMELQYLKQCGKRGQFSEEIYEKNLAALKKVTDLNELVKKPYNFMTQDVIEATVQCMIAQAEECEKMSVSKKEGERMILEEFSRCLQEIIEFSAKNVD
| Type | Start | End | Length |
| CDS |
44225 |
44553 |
329 |
| CDS |
44628 |
44761 |
134 |
| CDS |
44897 |
45701 |
805 |
| CDS |
45776 |
45883 |
108 |
| CDS |
45960 |
45975 |
16 |
| intron |
44554 |
44627 |
74 |
| intron |
44762 |
44896 |
135 |
| intron |
45702 |
45775 |
74 |
| intron |
45884 |
45959 |
76 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651563 |
hypothetical protein AaeL_AAEL005893 [Aedes aegypti] gb|EAT42616.1| hypothetical protein AaeL_AAEL005893 [Aedes aegypti] |
1e-74 |
| InterPro |
IPR005172 |
Tesmin/TSO1-like cysteine-rich |
|
| Pfam |
PF03638.10 |
Tesmin/TSO1-like CXC domain |
5.5e-26 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ008322 |
| H. sapiens |
ENSP00000407139 |
| C. quinquefasciatus |
CPIJ008324 |
| T. castaneum |
TC005724 |
| H. sapiens |
ENSP00000398265 |
| C. quinquefasciatus |
CPIJ020124 |
| D. melanogaster |
FBgn0033846 |
| S. invicta |
SI2.2.0_04654 |
| H. sapiens |
ENSP00000423475 |
| H. sapiens |
ENSP00000341947 |
| H. sapiens |
ENSP00000421045 |
| M. musculus |
ENSMUSG00000035310 |
| A. gambiae |
AGAP010380 |
| A. mellifera |
GB10684-PA |
| H. sapiens |
ENSP00000378698 |
| P. humanus |
PHUM472540-PA |
| P. vanderplanki |
Pv.00595 |
| N. vitripennis |
NV11808-PA |
| H. sapiens |
ENSP00000425844 |
| A. aegypti |
AAEL005893 |