MidgeBase gene description page [Pn.06770]
Outline
| Gene ID | Pn.06770 |
| Type | Protein coding gene |
| Scaffold | PnScaf5985 |
| Start | 9064 |
| End | 9926 |
| Direction | + |
Sequence
Transcript: 660 (bp)
ATGAAAATAATTTTGCTTTTTGTTTCGATTTGCTGCCTGCTAAACCTTACATTGTGTGTTGATCTTCAAGCTTTAAGCGACGTTGCAACTGAAGATTATACGAAAACTCTGATCCAATCTGAAGGCTATTTGGTGGAGGAATATGCAGTAAACACAACCGATGGATACGTCTTGAAGTTATTGCGAATGCCAGGAAGCAAACAATCCGCTTCAGCTAAAAATAAGACGGTTGTTTTCCTCATGCATGGCTTGCTGTGTTCGTCAATGGATTGGCTGATTCTCGGCGACAAGAAGGCTCTTCCCTACATGCTTGTTGATGCCGGCTTCGATGTTTTCCTTGGCAATGCGAGGGGAAACACGCATTCACGAAGGCACGTCCACCTTTCGCCCACCAGCAGAGACTTCTGGAAATTCTCATGGCACGAGATCGGCACAATCGACATTCCGGCGATGATTGATTTTGCATTGTCATTAACTCAACAAAGAGATCTACATTACGTCGGACATTCGCAGGGCACAACGAGCTTCTTCGTCGGTGCATCCACACAAAAGGAATTGAACGAGAAAGTTAGAACAATGCATGCACTCGGTGAGCAAATTGATGTTGAATTGTTGCAAGACAAACATTTGAAGAGCAAAATTGGAAAATGGGATTTTCAT
Protein: 220 (aa)
MKIILLFVSICCLLNLTLCVDLQALSDVATEDYTKTLIQSEGYLVEEYAVNTTDGYVLKLLRMPGSKQSASAKNKTVVFLMHGLLCSSMDWLILGDKKALPYMLVDAGFDVFLGNARGNTHSRRHVHLSPTSRDFWKFSWHEIGTIDIPAMIDFALSLTQQRDLHYVGHSQGTTSFFVGASTQKELNEKVRTMHALGEQIDVELLQDKHLKSKIGKWDFH
| Type | Start | End | Length |
| CDS |
9064 |
9165 |
102 |
| CDS |
9231 |
9450 |
220 |
| CDS |
9511 |
9618 |
108 |
| CDS |
9694 |
9923 |
230 |
| intron |
9166 |
9230 |
65 |
| intron |
9451 |
9510 |
60 |
| intron |
9619 |
9693 |
75 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_559998 |
AGAP003501-PA [Anopheles gambiae str. PEST] gb|EAL41497.4| AGAP003501-PA [Anopheles gambiae str. PEST] |
2e-54 |
| InterPro |
IPR006693 |
Partial AB-hydrolase lipase domain |
|
| InterPro |
IPR000073 |
Alpha/beta hydrolase fold-1 |
|
| Gene Ontology(BP) |
GO:0006629 |
lipid metabolic process |
|
| Pfam |
PF00561.15 |
alpha/beta hydrolase fold |
6e-09 |
| Pfam |
PF12695.2 |
Alpha/beta hydrolase family |
7.7e-05 |
| Pfam |
PF12697.2 |
Alpha/beta hydrolase family |
0.0043 |
| Pfam |
PF04083.11 |
Partial alpha/beta-hydrolase lipase region |
9.5e-20 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes