MidgeBase gene description page [Pn.06750]
Outline
| Gene ID | Pn.06750 |
| Type | Protein coding gene |
| Scaffold | PnScaf5964 |
| Start | 520 |
| End | 13591 |
| Direction | + |
Sequence
Transcript: 537 (bp)
ATGAAGAACATCCGAAGTTCGGATGATAACAAAAACACTAACATTCAACACATTTTCATTAATGGTCAAATTTGGTACGAAGCGACTTGTGATATCTCACCCGACACCGAGCTACTGCTTGGACCGAAAGTTCCTTTACTCATCAACGACATGCGCAACGAGAACGACGACCGTTCCGGCTCAGGTTCACAACATAGTGGCGCGTACGAAGAAGACTTTAATGCCTCATCGAACGATTTAGACAGCAATCAACAGGAGTCCACACACGAGAACAATAATGAGTCCATCGAAGACGAAGACGACGACGTCGATGGCATAGATGCACGCTGCCTCGTGTGCGAACGTCAGTGCGGTGATATTGACCAAAAGATTGAAGCCTCGCGATACTGTCGCGCAGCATGTGGAGTCGCGCACTGGAAAGTGAAATTATTGAGCTGGCGCAATCTGCATGCCACCGTCATTGTGCAAGCCATTGCGACACAGAGAATTCAATTCCAGGCCATTCATGAACTTTCCGCGCAACTTCCGCGTACGGCC
Protein: 179 (aa)
MKNIRSSDDNKNTNIQHIFINGQIWYEATCDISPDTELLLGPKVPLLINDMRNENDDRSGSGSQHSGAYEEDFNASSNDLDSNQQESTHENNNESIEDEDDDVDGIDARCLVCERQCGDIDQKIEASRYCRAACGVAHWKVKLLSWRNLHATVIVQAIATQRIQFQAIHELSAQLPRTA
| Type | Start | End | Length |
| CDS |
520 |
588 |
69 |
| CDS |
669 |
783 |
115 |
| CDS |
11389 |
11569 |
181 |
| CDS |
13417 |
13588 |
172 |
| intron |
589 |
668 |
80 |
| intron |
784 |
11388 |
10605 |
| intron |
11570 |
13416 |
1847 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001862948 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS37801.1| conserved hypothetical protein [Culex quinquefasciatus] |
5e-15 |
| Pfam |
PF12855.2 |
Life-span regulatory factor |
0.68 |
| Pfam |
PF01753.13 |
MYND finger |
0.12 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes