MidgeBase gene description page [Pn.06717]
Outline
| Gene ID | Pn.06717 |
| Type | Protein coding gene |
| Scaffold | PnScaf5925 |
| Start | 10908 |
| End | 11990 |
| Direction | + |
Sequence
Transcript: 876 (bp)
ATGGATTCGTTTCAAATTTCCATATATGCCTCGATTGGGAGCTGCTTCTCTTTATCCTGCTTGTACGTTGCGAGTCTTTATGTGTGGAATGCAGAAGAAAATCGAGATCATCCGTCGACGATAAAGAAACGGTTCTTCAGTGTATTTATCGTGATGCTGATTTCACCGCTCTTCATCTACCTCTTCTCGTCACCTGATCTCCTCAAAAACTACTCAATCTGGTATGTGATGGGTCTGCGACATGAAGGACTGCTGTCGGCACTCATCTATCCACTTCTCCTCACGATGGTTCTCTTTCTCGGACCGCTGAGTGTCCAATTGACAAATAGCTTGTGGAAGGTGTACTCGGAACCGATGTTCTGGTTCAACTACTGCCAAAATCTGCTGTGGCTGCGAAATCACGTCGTGGCGCCGCTCTCCGAAGAGTTCACGTTCAGAGCGTGCATGCTGCCTCTGCTGCTGCAAACCTTCTCGCCCATCACCTCCATTCTCATAACGCCGATGTTCTTTGGCGTCGCCCACTTGCATCACATGATCGAGCGACTGAGAAGCGGAATGGACAAGAAAACTGCAATCATTATATCATTCTTCCAATTCTTCTACACATCCATCTTCGGAATATACTCCGCATATCTTTTCGTGAGAACCGGGCACTTTATTGCGCCTTTTATCGTTCACGCTTTCTGCAACCACATGGGTTTTCCTGATATTCCGGATCTCATCGCTCAACCGGAGCCAAAACGTGGCGTTTTCTTCGTTCTCTACCTTCTCGGCCTAATCGGCTTCATTATTCTGCTGCCCACGATGACTGAACCGCAGTGGTATCAAAATAATCAGTTTTGGTCACACAATCACACAAAGTATAATTCTAGCATT
Protein: 292 (aa)
MDSFQISIYASIGSCFSLSCLYVASLYVWNAEENRDHPSTIKKRFFSVFIVMLISPLFIYLFSSPDLLKNYSIWYVMGLRHEGLLSALIYPLLLTMVLFLGPLSVQLTNSLWKVYSEPMFWFNYCQNLLWLRNHVVAPLSEEFTFRACMLPLLLQTFSPITSILITPMFFGVAHLHHMIERLRSGMDKKTAIIISFFQFFYTSIFGIYSAYLFVRTGHFIAPFIVHAFCNHMGFPDIPDLIAQPEPKRGVFFVLYLLGLIGFIILLPTMTEPQWYQNNQFWSHNHTKYNSSI
| Type | Start | End | Length |
| CDS |
10908 |
10981 |
74 |
| CDS |
11055 |
11084 |
30 |
| CDS |
11149 |
11750 |
602 |
| CDS |
11818 |
11987 |
170 |
| intron |
10982 |
11054 |
73 |
| intron |
11085 |
11148 |
64 |
| intron |
11751 |
11817 |
67 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_309636 |
AGAP004086-PA [Anopheles gambiae str. PEST] gb|EAA05370.5| AGAP004086-PA [Anopheles gambiae str. PEST] |
1e-109 |
| InterPro |
IPR003675 |
CAAX amino terminal protease |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Pfam |
PF02517.11 |
CAAX protease self-immunity |
1.2e-17 |
| Pfam |
PF14018.1 |
Domain of unknown function (DUF4234) |
2.2 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ002690 |
| M. musculus |
ENSMUSG00000024889 |
| B. mori |
BGIBMGA004897-TA |
| N. vitripennis |
NV11281-PA |
| S. invicta |
SI2.2.0_11598 |
| T. castaneum |
TC008733 |
| A. gambiae |
AGAP004086 |
| H. sapiens |
ENSP00000309163 |
| H. melpomene |
HMEL010041-PA |
| H. sapiens |
ENSP00000435409 |
| A. aegypti |
AAEL014946 |
| P. humanus |
PHUM444940-PA |
| H. sapiens |
ENSP00000436600 |
| D. melanogaster |
FBgn0029121 |
| P. vanderplanki |
Pv.00696 |
| D. plexippus |
DPOGS202245PA |
| A. mellifera |
GB20088-PA |