MidgeBase gene description page [Pn.06691]
Outline
| Gene ID | Pn.06691 |
| Type | Protein coding gene |
| Scaffold | PnScaf5915 |
| Start | 12316 |
| End | 13084 |
| Direction | - |
Sequence
Transcript: 669 (bp)
ATGTCGTCTAACGAGGAACTTCTCGATAATTCACAGCCGATCCTTTACTCCTATTGGCGTTCGAGCTGCAGCTGGAGAGTCCGAATATGCCTCAACCTCAAGGAAATTCCCTACGACATAAAGCCAATAAGTCTGATCAAATCAGGCGGAGAGCAGCATTGTAACGAGTATCGCGAGGTCAATCCCATGGAGCAGGTGCCCGCTCTCCAAATCGACGGCCACACGCTCATCGAGTCGATGGCCATCATGCACTATCTGGAAGAGACGCGACCGCAGCGGCCGCTGCTGCCACAGGACTTTCACAAGCGCGCCAAAGTTCGCGAGTTGTGCGAGATCATCGCTTCCGGCATCCAGCCGCTCCAGAATCTCATCGTACTCATTCACGTCGGCGAGGAGAAAAAGAAGGAGTGGGCGCAGCACTGGATTACGCGCGGTTTCCGCGCCGTCGAGAAGCTGCTGTCGACCAGCGCTGGCAAGTACTGCGTCGGTGATGAAATCACTCTCGCTGACTGCTGCCTCGTCCCGCAAGTCTTCAACGCACGGCGTTTCCACGTCGACTTGAGGCCTTTTCCGATCATCCTCAGAATCGATCGCGAGCTCGAAACTCATCCGGCATTCCGGGCAGCTCATCCCTCCTCGCAGCCCGACTCGCCGCCCGAAATCACCAAA
Protein: 223 (aa)
MSSNEELLDNSQPILYSYWRSSCSWRVRICLNLKEIPYDIKPISLIKSGGEQHCNEYREVNPMEQVPALQIDGHTLIESMAIMHYLEETRPQRPLLPQDFHKRAKVRELCEIIASGIQPLQNLIVLIHVGEEKKKEWAQHWITRGFRAVEKLLSTSAGKYCVGDEITLADCCLVPQVFNARRFHVDLRPFPIILRIDRELETHPAFRAAHPSSQPDSPPEITK
| Type | Start | End | Length |
| CDS |
12319 |
12442 |
124 |
| CDS |
12540 |
13084 |
545 |
| intron |
12443 |
12539 |
97 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADK66969 |
glutathione s-transferase [Chironomus riparius] |
1e-118 |
| InterPro |
IPR005955 |
Maleylacetoacetate isomerase |
|
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(BP) |
GO:0009072 |
aromatic amino acid family metabolic process |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
1.9e-13 |
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
2.2e-06 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
1e-13 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
1.7e-19 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
1.3e-07 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000216465 |
| P. vanderplanki |
Pv.04770 |
| D. melanogaster |
FBgn0037697 |
| A. aegypti |
AAEL011934 |
| H. sapiens |
ENSP00000452498 |
| H. sapiens |
ENSP00000450487 |
| D. melanogaster |
FBgn0037696 |
| A. gambiae |
AGAP002898 |
| P. humanus |
PHUM236630-PA |
| M. musculus |
ENSMUSG00000021033 |
| D. plexippus |
DPOGS214720PA |
| H. sapiens |
ENSP00000451976 |
| N. vitripennis |
NV23721-PA |
| A. mellifera |
GB17672-PA |
| S. invicta |
SI2.2.0_80076 |
| T. castaneum |
TC009842 |
| H. melpomene |
HMEL009164-PA |