MidgeBase gene description page [Pn.06581]
Outline
| Gene ID | Pn.06581 |
| Type | Protein coding gene |
| Scaffold | PnScaf5828 |
| Start | 45585 |
| End | 47233 |
| Direction | + |
Sequence
Transcript: 267 (bp)
ATGGGATTGAAAGAGGATTTTGATGCCGCTGCCGAAAAAGTCAAGAACTTGAAATCAAAGCCAACGGATCAAGATCTCCTGGAGCTCTATTCGTACTTTAAACAAGCGACAGTCGGTGATAACAACACAGAAAAGCCCGGCATGCTTGACTTCAAAGGCAAAGCTAAATGGGAAGCGTGGAACGCACGAAAGGGTTTGTCAGCCGACGATGCAATGACAAAGTACATCGAGAAGGTAGACTCGCTCGTCTCATCGCTGGGCTTGAAT
Protein: 89 (aa)
MGLKEDFDAAAEKVKNLKSKPTDQDLLELYSYFKQATVGDNNTEKPGMLDFKGKAKWEAWNARKGLSADDAMTKYIEKVDSLVSSLGLN
| Type | Start | End | Length |
| CDS |
45585 |
45599 |
15 |
| CDS |
46254 |
46298 |
45 |
| CDS |
46569 |
46638 |
70 |
| CDS |
46992 |
47054 |
63 |
| CDS |
47157 |
47230 |
74 |
| intron |
45600 |
46253 |
654 |
| intron |
46299 |
46568 |
270 |
| intron |
46639 |
46991 |
353 |
| intron |
47055 |
47156 |
102 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001356518 |
GA21120 [Drosophila pseudoobscura pseudoobscura] gb|EAL33582.2| GA21120 [Drosophila pseudoobscura pseudoobscura] |
2e-26 |
| InterPro |
IPR000582 |
Acyl-CoA-binding protein, ACBP |
|
| InterPro |
IPR022408 |
Acyl-CoA-binding protein, ACBP, conserved site |
|
| InterPro |
IPR014352 |
FERM/acyl-CoA-binding protein, 3-helical bundle |
|
| Gene Ontology(MF) |
GO:0000062 |
fatty-acyl-CoA binding |
|
| Pfam |
PF00373.13 |
FERM central domain |
0.029 |
| Pfam |
PF00887.14 |
Acyl CoA binding protein |
3.3e-32 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000442917 |
| H. melpomene |
HMEL010952-PA |
| T. castaneum |
TC012627 |
| A. gambiae |
AGAP000546 |
| N. vitripennis |
NV15619-PA |
| P. vanderplanki |
Pv.12001 |
| H. sapiens |
ENSP00000376815 |
| H. sapiens |
ENSP00000348116 |
| H. sapiens |
ENSP00000386486 |
| H. sapiens |
ENSP00000440698 |
| M. musculus |
ENSMUSG00000026644 |
| H. sapiens |
ENSP00000311117 |
| H. sapiens |
ENSP00000439012 |
| M. musculus |
ENSMUSG00000026385 |
| A. aegypti |
AAEL013844 |
| B. mori |
BGIBMGA002906-TA |
| C. quinquefasciatus |
CPIJ003820 |
| D. melanogaster |
FBgn0031992 |
| A. mellifera |
GB16162-PA |
| D. plexippus |
DPOGS212445PA |
| H. sapiens |
ENSP00000367453 |
| P. humanus |
PHUM568230-PA |