MidgeBase gene description page [Pn.06444]
Outline
| Gene ID | Pn.06444 |
| Type | Protein coding gene |
| Scaffold | PnScaf5728 |
| Start | 59573 |
| End | 62078 |
| Direction | - |
Sequence
Transcript: 1857 (bp)
ATGAAAATCGACTACCATGTGATAGAAATTCAAAATTCTCTGGGAGAGCTTTCAACCAACTACCCATCCACGATTCTGATACCAGAGTATGAACATCACAATTTCAATCCAATCACGAATTCGCTTCATCGACAGCAGACCATCTACGAAAGCACTTACGATGCCAATAAACTCCGTGACTTGATAAATAAAGCGAGATTTGCGCGCTGTCGTGCACGATTCCCTCTACCAATAATATTATATAAAGGCAAATACATTTGCCGATCGGCCACATTATCAGGCGGACCTGAAATTTACACACGCAGTGGCTTCGACTATTTATTTGCCGGCGACAATTCATCCGCCAAGTCGCCAACGTCTCTCGACGAGGATGCCTATGAGGCGCACGAGTCGTCGCTCAACGACGAGACGTTTGCCGGCGAGGAGGAGAAGGGCAACAGCGAGTGGCAGTTGTTTGACCGAGTTCGCAACCAAGACATTAAGCTACTAAAGACTTTTAACGTGGGAACAATTGTTGATTTCATGGTGGAAAAGAAGAAAGTGAAATTTCTAATGAATGTTACTTCGTCCGAGAAAGTCGATAAGGAGAAGCGATATCAAGAGTTCCAAATCATCTCCTTGCCCTATCCGGGCTGTGAGTTCTTCAGAGAATTTCGTGATAACAATTATTCCGGCGAAGGATTAATTTTCGATTGGTCACAAAAGTCGGTAGATGCTGAAATCGGAGTGCCTCAAGATTGCGTGCAAACCAATATTGATTGGGAAAACTACAAAAATTGGGATCTGGTTCAAATTACGCAGAACTACATGAAGCTCTTGCTGAAGTCGCTGCAGGACAATAGTTCTGGCCTTTTGATTCACTGCATAAGTGGATGGGATCGCACGCCTCTCTTCGTATCTCTCTTACGTCTCTCGCTGTGGGCCGACGGCATGATTCATCAATCGTTGAGTGCTATTCAGATGCTTTATTTCACTATAGGCTATGATTGGCTGTTATTCGGTCATAATCTTCCCGATAGACTTCAAAAAGGCGAGGACATATTCTTCTTCTGCTTTTACGTGCTGAAATATCTGATGGACGACGAGTACAGTATTGCTGGACAAAGATTTAGAAGCAGCAAGCAAAGCAGCAGTGGGAGTTCTATCGGCGTGATAAGAACGGACAGCGACGTATTCGACGGCTTTGATGCGGACAGCAGAGGCTCGAGTCTTTCATTGAACTCAACGTGCAGTGCGAGAAGTCAACAGGATCACAATTTGACGGCTTCTTCGAATGGCCTCATGCACGACGACAACAATGCAAACGGGACGAGTCCAATGTCAGTTCCAAAGATGGCGAATCACGAGCACAAGATTCACCGCCAGCGACAGGAGTCGTCTTCGAGCGTGAGTGTCGGCAGTTGGCAGTTGATTAGCGGGACGGGAAGTCTAAGGAGTCAAGACTCGAACATAGTTGTAATCAATGAATTTCATCATCACAATCAGTGCAATATCAACAACATCAACAACAACAGTAGTAGTTCGTGCTCAAACAATCCACCATCCTCAACTCAGTCAAACATGTGTTCAACTCAGCCCAACAGCAGCGGCGCATTCGGAGGCGGTGGAGCAGTGGGCAGTAGCAGCAGCAGCAGCCATCCAACAGTTAACATCTCAAACAACGAGTCAAGTACAATCGTTGACGACGATTGCTTCACTGCCAACGATTATTTCATGCGCAGGGAGCGACTCACGTCAGTCCGAACTTTATTTTACAACTGCTACAGCTCAACCATCGGCTACAAGTTCAAGAACGGCTCGGAAATCGGCCTGGGATCTCTGCTCGGGAACTTTGCGGAGAAAGTTGGTCTAACGAAA
Protein: 619 (aa)
MKIDYHVIEIQNSLGELSTNYPSTILIPEYEHHNFNPITNSLHRQQTIYESTYDANKLRDLINKARFARCRARFPLPIILYKGKYICRSATLSGGPEIYTRSGFDYLFAGDNSSAKSPTSLDEDAYEAHESSLNDETFAGEEEKGNSEWQLFDRVRNQDIKLLKTFNVGTIVDFMVEKKKVKFLMNVTSSEKVDKEKRYQEFQIISLPYPGCEFFREFRDNNYSGEGLIFDWSQKSVDAEIGVPQDCVQTNIDWENYKNWDLVQITQNYMKLLLKSLQDNSSGLLIHCISGWDRTPLFVSLLRLSLWADGMIHQSLSAIQMLYFTIGYDWLLFGHNLPDRLQKGEDIFFFCFYVLKYLMDDEYSIAGQRFRSSKQSSSGSSIGVIRTDSDVFDGFDADSRGSSLSLNSTCSARSQQDHNLTASSNGLMHDDNNANGTSPMSVPKMANHEHKIHRQRQESSSSVSVGSWQLISGTGSLRSQDSNIVVINEFHHHNQCNINNINNNSSSSCSNNPPSSTQSNMCSTQPNSSGAFGGGGAVGSSSSSSHPTVNISNNESSTIVDDDCFTANDYFMRRERLTSVRTLFYNCYSSTIGYKFKNGSEIGLGSLLGNFAEKVGLTK
| Type | Start | End | Length |
| CDS |
59576 |
60125 |
550 |
| CDS |
60384 |
60584 |
201 |
| CDS |
60661 |
60787 |
127 |
| CDS |
60854 |
60961 |
108 |
| CDS |
61027 |
61691 |
665 |
| CDS |
61873 |
62078 |
206 |
| intron |
60126 |
60383 |
258 |
| intron |
60585 |
60660 |
76 |
| intron |
60788 |
60853 |
66 |
| intron |
60962 |
61026 |
65 |
| intron |
61692 |
61872 |
181 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR19163 |
hypothetical protein AND_22963 [Anopheles darlingi] |
0.0 |
| InterPro |
IPR016130 |
Protein-tyrosine phosphatase, active site |
|
| Gene Ontology(BP) |
GO:0016311 |
dephosphorylation |
|
| Gene Ontology(MF) |
GO:0004725 |
protein tyrosine phosphatase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF13849.1 |
Myotubularin Y_phosphatase-like |
5.1e-19 |
| Pfam |
PF00102.22 |
Protein-tyrosine phosphatase |
0.0091 |
| Pfam |
PF13350.1 |
Tyrosine phosphatase family |
0.00013 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ000895 |
| A. aegypti |
AAEL002370 |
| D. melanogaster |
FBgn0027506 |
| H. sapiens |
ENSP00000323462 |
| S. invicta |
SI2.2.0_02810 |
| P. vanderplanki |
Pv.08499 |
| H. sapiens |
ENSP00000401993 |
| N. vitripennis |
NV13929-PA |
| H. sapiens |
ENSP00000334070 |
| A. gambiae |
AGAP009826 |
| M. musculus |
ENSMUSG00000030269 |
| A. mellifera |
GB11379-PA |
| H. sapiens |
ENSP00000296003 |