MidgeBase gene description page [Pn.06373]
Outline
| Gene ID | Pn.06373 |
| Type | Protein coding gene |
| Scaffold | PnScaf5692 |
| Start | 919 |
| End | 1410 |
| Direction | + |
Sequence
Transcript: 372 (bp)
ATGTTTAAAGTTTTTACGATTTTAGTGTTCATTTTTGCTACATTTAGTGGCATTTTCAGCTCACCGGCCACCGGCGAAAAAATTGAAAATTTCATAGTTGGCGGCACAAATGCTACGGCAGGGCAATTCCCCCACACAGTTTCATTAAGAACGATCGCGAATGTTCACTTCTGCGGCGGTTTCATCATCAATAGGCGCTGGGTCGGAACAACCGCGCTTTGCATTTTTGGCCGCACATTGGACAATACTTTAAGCGTCGTTGGCACGCTTCTGTTGAGGGGAATAGGAATGCAACACAGGACGTGCTGGTTCCGGACTCATCAGCAGTACGACAGGGAGACTCTTGCGAACAACATCGGACTGATTTGGGAG
Protein: 124 (aa)
MFKVFTILVFIFATFSGIFSSPATGEKIENFIVGGTNATAGQFPHTVSLRTIANVHFCGGFIINRRWVGTTALCIFGRTLDNTLSVVGTLLLRGIGMQHRTCWFRTHQQYDRETLANNIGLIWE
| Type | Start | End | Length |
| CDS |
919 |
1132 |
214 |
| CDS |
1201 |
1349 |
149 |
| CDS |
1399 |
1407 |
9 |
| intron |
1133 |
1200 |
68 |
| intron |
1350 |
1398 |
49 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ACF19792 |
serine-type enodpeptidase SP [Chironomus riparius] |
5e-26 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
3e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes