MidgeBase gene description page [Pn.06320]
Outline
| Gene ID | Pn.06320 |
| Type | Protein coding gene |
| Scaffold | PnScaf5649 |
| Start | 19789 |
| End | 30282 |
| Direction | - |
Sequence
Transcript: 1071 (bp)
ATGTCTAAATTAAAGGTCTGCATTGTTGGGAGCGGCAATTGGGGATCGGCGATTGCAAAAATTGTTGGAAGCAACACGAAGAGATTATCGCAATTTGAAGATCGTGTCAATATGTACGTTTACGAGGAAACAATCAATGGTCGAAAGCTATCGGAAATTATAAACGAAGATCACGAGAACGTCAAATACCTTCCCGGGCACAAGCTTCCAGAAACGATTGTCGCAGTTCCGGACTTGGTAAAAGCCGCTGAGGACGCAGACATTTTCGTGTTTGTGATTCCGCATCAGTTTGTGAGAAACATAAGCGGAACGCTGGCTGGGAAGATAAAGAAGTCTGCAGTTGGACTGTCACTCATCAAAGGATTCGAAATCGCCGAAGGCGGAGGAATCGAGCTGATCTCGAACGTCATCTCAAAGCGCCTCGAAATTCCCTGTTCCGTGCTTATGGGAGCGAATCTCGCGAAGGAAGTCGCTGACGAGAAGTTCTGCGAGACGACAATCGGCTGCAAGGACGAGAAGCTGGCGCCGCTGTTGAGAGACCTCTTCCAAACGCCAAACTTTCGGGTCGTGACGACCGACGATGCCCAGACAGTGGAAGTGTGCGGCGCCCTGAAAAACATCGTCGCTTGTGGAGCTGGCTTCAGCGACGGTCTCGGCCTCGGAGACAACACAAAGGCCGCCATCATTCGCCTCGGTCTCATGGAAATGATAAAGTTCGTGGAGGTGTTTTACAATGGCAGCAAGATGTCGACCCTTTTCGAGTCGTGTGGCGTCGCCGATCTGGTCACCACTTGCTACGGCGGCAGAAACAGAATGTGCAGCGAGCAGTTTGTGAAAACCGGCCACGACTTTAAACAACTCGAGGCTGACATTCTCAATGGCCAAACGTTGCAGGGACCCGAGACTGCCAAGGAAGTCTTCCAGATGCTGCAGGGCAAGAACATGGAGGAAAAGTTTCCACTCTTCACCGCCATCCATCGCATTTGCATCGGCGAGATAAAGCCACAGGACCTCATCGACTGCATTCGGAACCATCCGGAGCACATAAGATGGCGTGAGTTGATTCAAATT
Protein: 357 (aa)
MSKLKVCIVGSGNWGSAIAKIVGSNTKRLSQFEDRVNMYVYEETINGRKLSEIINEDHENVKYLPGHKLPETIVAVPDLVKAAEDADIFVFVIPHQFVRNISGTLAGKIKKSAVGLSLIKGFEIAEGGGIELISNVISKRLEIPCSVLMGANLAKEVADEKFCETTIGCKDEKLAPLLRDLFQTPNFRVVTTDDAQTVEVCGALKNIVACGAGFSDGLGLGDNTKAAIIRLGLMEMIKFVEVFYNGSKMSTLFESCGVADLVTTCYGGRNRMCSEQFVKTGHDFKQLEADILNGQTLQGPETAKEVFQMLQGKNMEEKFPLFTAIHRICIGEIKPQDLIDCIRNHPEHIRWRELIQI
| Type | Start | End | Length |
| CDS |
19792 |
19816 |
25 |
| CDS |
29125 |
30070 |
946 |
| CDS |
30127 |
30185 |
59 |
| CDS |
30242 |
30282 |
41 |
| intron |
19817 |
29124 |
9308 |
| intron |
30071 |
30126 |
56 |
| intron |
30186 |
30241 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653595 |
glycerol-3-phosphate dehydrogenase [Aedes aegypti] gb|EAT47333.1| glycerol-3-phosphate dehydrogenase [Aedes aegypti] |
1e-154 |
| InterPro |
IPR017751 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic |
|
| InterPro |
IPR008927 |
6-phosphogluconate dehydrogenase, C-terminal-like |
|
| InterPro |
IPR013328 |
Dehydrogenase, multihelical |
|
| InterPro |
IPR016040 |
NAD(P)-binding domain |
|
| InterPro |
IPR011128 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal |
|
| InterPro |
IPR006109 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal |
|
| InterPro |
IPR006168 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent |
|
| Gene Ontology(BP) |
GO:0006072 |
glycerol-3-phosphate metabolic process |
|
| Gene Ontology(BP) |
GO:0046168 |
glycerol-3-phosphate catabolic process |
|
| Gene Ontology(BP) |
GO:0005975 |
carbohydrate metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(CC) |
GO:0009331 |
glycerol-3-phosphate dehydrogenase complex |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0016614 |
oxidoreductase activity, acting on CH-OH group of donors |
|
| Gene Ontology(MF) |
GO:0016616 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0000166 |
nucleotide binding |
|
| Gene Ontology(MF) |
GO:0051287 |
NAD binding |
|
| Gene Ontology(MF) |
GO:0042803 |
protein homodimerization activity |
|
| Gene Ontology(MF) |
GO:0004367 |
glycerol-3-phosphate dehydrogenase [NAD+] activity |
|
| Gene Ontology(MF) |
GO:0050662 |
coenzyme binding |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF07479.9 |
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus |
1.3e-53 |
| Pfam |
PF03807.12 |
NADP oxidoreductase coenzyme F420-dependent |
0.038 |
| Pfam |
PF01210.18 |
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus |
2e-52 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000446768 |
| P. vanderplanki |
Pv.12349 |
| T. castaneum |
TC000688 |
| M. musculus |
ENSMUSG00000023019 |
| D. plexippus |
DPOGS208883PA |
| N. vitripennis |
NV14099-PA |
| P. humanus |
PHUM174010-PA |
| P. vanderplanki |
Pv.13975 |
| D. melanogaster |
FBgn0001128 |
| S. invicta |
SI2.2.0_13688 |
| A. aegypti |
AAEL001593 |
| H. melpomene |
HMEL002642-PA |
| H. sapiens |
ENSP00000301149 |
| H. sapiens |
ENSP00000282541 |
| C. quinquefasciatus |
CPIJ000232 |
| S. invicta |
SI2.2.0_15005 |
| A. gambiae |
AGAP007593 |
| N. vitripennis |
NV14101-PA |
| M. musculus |
ENSMUSG00000050627 |
| A. mellifera |
GB20014-PA |
| B. mori |
BGIBMGA012560-TA |