MidgeBase gene description page [Pn.06295]
Outline
| Gene ID | Pn.06295 |
| Type | Protein coding gene |
| Scaffold | PnScaf5636 |
| Start | 60717 |
| End | 63886 |
| Direction | + |
Sequence
Transcript: 510 (bp)
ATGGAATTACTCTCGCTTGGTCAATATTTCAGCGGAGGCAACTATCGAGTCTATTTGCTGGGTAATCCAATTATATGGTGGAGCAATCTCGTCTTTCTGGCTCTGTTTCTCATCACATACTTCGTCGCTGCTGTGAAGGAACAGCGCGGACTCGACGTTGCCGAGAGCGATGCCATCAGAGCAAACAAATGGCGTTCATTAAGAGCCGGAGCGTGGCTATTTGTCGGATGGATTCTGCACTATTTGCCATTCTGGGCGATGGGGCGAGTGCTCTACTTTCATCACTACTTTCCCGCTGTCATTTTCAATTCGATGCTAACAGGCGTGATGTTCAACTACCTCACCGAGCGACTGCCAAGCTGGATGAAACAAATAGCGCTTGGCACAGTGCTCGGCGTCGTAATCTACAGCTTCAAGCTCTTCTATCCGCTTGCGTACGGATTTGCTGATGCATCGACAGAGAACAACTCCACAATGCACGGATTACGCTGGATGGAGTCGTGGGAGTTC
Protein: 170 (aa)
MELLSLGQYFSGGNYRVYLLGNPIIWWSNLVFLALFLITYFVAAVKEQRGLDVAESDAIRANKWRSLRAGAWLFVGWILHYLPFWAMGRVLYFHHYFPAVIFNSMLTGVMFNYLTERLPSWMKQIALGTVLGVVIYSFKLFYPLAYGFADASTENNSTMHGLRWMESWEF
| Type | Start | End | Length |
| CDS |
60717 |
60734 |
18 |
| CDS |
60825 |
60987 |
163 |
| CDS |
61865 |
62005 |
141 |
| CDS |
63696 |
63883 |
188 |
| intron |
60735 |
60824 |
90 |
| intron |
60988 |
61864 |
877 |
| intron |
62006 |
63695 |
1690 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663919 |
mannosyltransferase 1, putative [Aedes aegypti] gb|EAT34004.1| mannosyltransferase 1, putative [Aedes aegypti] |
1e-55 |
| Pfam |
PF03899.10 |
ATP synthase I chain |
8 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.12513 |