MidgeBase gene description page [Pn.06264]
Outline
| Gene ID | Pn.06264 |
| Type | Protein coding gene |
| Scaffold | PnScaf5623 |
| Start | 5489 |
| End | 6817 |
| Direction | + |
Sequence
Transcript: 1200 (bp)
ATGAAGTCAAATTTTTTAACTCAAGCCTATTACACACTAATTGCCTGCATTGGCAGCATCCTTTTCGGCATCGGTTTAGGTTGGAGCTCACCGAGTGCAGTTAAAATATTGGAAACCGAGAAAACCTTCGACATGACGGAAAATCAATTTGCCTGGGCAGTTTCAATGAATTCCTTCGGGATGATGGTGGCGTGCTCGGTAAATGGCCGCATAAGAGATCGCTTTGGATCAAAAATCGGTATTCTTATATTCACGCTTCCAAGTTTCGTCGGCTGGATGGTGCTGACTTTTTCCGCAGCATGGTGGATGGTAATATTGGGGAGATTCTTAGTCGGCATTTCAGCGGGTGGATATGGCTACATTGTGCTCACTTACATTGGTGAATGTGCTGCAAAGGAAGTTCGCGGAACGCTGCTGATTTTCTTTGAAATACTGTTGAAGGTCGGTATTCTGTTCAGTTTCACTCTCGGCATGACAATCAACATTAAGCTGACAAATGCGATTTGCGGAGCAATTGCAGTTTTCTACGGATTCGTTTTTCTGACGCTTCCCGAGAGTCCATGGTTTCTGTTGAAACAGCGCAAACGAGCCAAGGCTAAGCAGTCACTCATATGCTGGCTTGGCAGCGCCAGTCTAGCGGAAAGGGAGCTGGATAGTATCGAAGAAGAAATGGTTCTATTAGAAGCTCAAAGAAAGTCATTGTGGGAAGAGATTAGACAGGAAGCGACACGCAAAGCCTTCTTGATTACAATGGCAATGCTCATTTTCCTTCAGATGTCTGGAGTGATTCCGATAGGCTTTTATACAACAAAAATCTTGAATCAGAGTGGTTCTAGTCTCAATCCATTAGCTATGACCGCTTTCCTTGGATTAATGCAATTGGTCTCGAGCTTAATTGCTGCTGCCTTCATTGATCGTTTTGGAAGACGCTTTCTTTTTATTATTTCGTATGGAATAATGATTGTTAACCAGATCGGCTGCGGCATTTATTTCTACGTTAAGGACACCGTCGACATTTCTGGTTATGAGTGGATATTAATCTTCATGCTCTGCTTCTATCTATTTGGCTTTGCTGTTGGAGCTGGGAGCGTTACATACCTACTGATTGGTGAAATGTTCTCATTTAACGCAAAAAGGGTAATGACCTCTGTTATCTCTGTCTACTCGTATGAATCAACATTTATTCGAACTACTTTTTAT
Protein: 400 (aa)
MKSNFLTQAYYTLIACIGSILFGIGLGWSSPSAVKILETEKTFDMTENQFAWAVSMNSFGMMVACSVNGRIRDRFGSKIGILIFTLPSFVGWMVLTFSAAWWMVILGRFLVGISAGGYGYIVLTYIGECAAKEVRGTLLIFFEILLKVGILFSFTLGMTINIKLTNAICGAIAVFYGFVFLTLPESPWFLLKQRKRAKAKQSLICWLGSASLAERELDSIEEEMVLLEAQRKSLWEEIRQEATRKAFLITMAMLIFLQMSGVIPIGFYTTKILNQSGSSLNPLAMTAFLGLMQLVSSLIAAAFIDRFGRRFLFIISYGIMIVNQIGCGIYFYVKDTVDISGYEWILIFMLCFYLFGFAVGAGSVTYLLIGEMFSFNAKRVMTSVISVYSYESTFIRTTFY
| Type | Start | End | Length |
| CDS |
5489 |
5531 |
43 |
| CDS |
5599 |
5864 |
266 |
| CDS |
5924 |
6814 |
891 |
| intron |
5532 |
5598 |
67 |
| intron |
5865 |
5923 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661118 |
sugar transporter [Aedes aegypti] gb|EAT37102.1| sugar transporter [Aedes aegypti] |
1e-56 |
| InterPro |
IPR005829 |
Sugar transporter, conserved site |
|
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR005828 |
General substrate transporter |
|
| InterPro |
IPR003663 |
Sugar/inositol transporter |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0022857 |
transmembrane transporter activity |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Gene Ontology(MF) |
GO:0022891 |
substrate-specific transmembrane transporter activity |
|
| Pfam |
PF06609.8 |
Fungal trichothecene efflux pump (TRI12) |
0.00021 |
| Pfam |
PF14015.1 |
Protein of unknown function (DUF4231) |
2.3 |
| Pfam |
PF00083.19 |
Sugar (and other) transporter |
7.4e-55 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
3e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.06262 |
| Pn.06263 |
| Pn.06265 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.01632 |