MidgeBase gene description page [Pn.06204]
Outline
| Gene ID | Pn.06204 |
| Type | Protein coding gene |
| Scaffold | PnScaf5543 |
| Start | 3063 |
| End | 5097 |
| Direction | - |
Sequence
Transcript: 1062 (bp)
ATGAACTCATCAATGGATGCACTTACAACGATTTTGGACCTCTACGTGCCCGAGTACATCACAGCATATGTGAAGACAATTCACTACGTGCCATGGCTGTTTTCACTGCTCGGTTCCGCGCTTATAGGTCTTAGCGGCATCCTGCCCCTGATCATCATCCCGAGTGTCGAGCCGGGCAAGGAGAGCGAAATGAAAAATCCTGCTGACTCAAAGTTCCTGAAGACGCTACTGAGCTTCGCCGTCGGTGGCCTCTTGGGCGATGTATTCCTGCACCTGCTGCCCGAAGCTTGGGAGTACGACATGAAGGAGCGCGCTAATAGTGGCGATGAGCATCCGTCGATAAGAAGCGGCATGTGGGTGCTGAGCGGCGTTCTCATCTTTACGATTGTCGAGAAAATCTTCAGTGGCTACGCGAACGCAGACGAAAACAATCCGCAGCCGAAGTGCGTTGAGATTGCAAATTGTCTGATGCGTCGCAACGGCGGGAAGCTCCCGGAGGGTGCAACGACTTGCGCGCCAAACGGCTCGTGTGACATTGAGGACATTCCCAACGGATGCTTCCTCGCCGCCGAAAAGGACAAGAAGGGCAAGGAACAATCGTCGAAGAAGGTCGCCGGCTATTTAAATCTCCTCGCCAACTCCATCGATAACTTCACGCACGGGCTGGCTGTTGCTGGGTCGTTTTTGGTGTCGATGCGGCACGGCATTCTCGCGACTTTTGCCATTTTGCTGCACGAGATTCCGCACGAGGTCGGCGACTTTGCCATTTTGCTGCGGTCAGGATTTACGCGATGGGACGCGGCCAAGGCACAGCTCCTCACGGCAACGGCCGGCTTGATGGGCGCCCTCGTGGCCATCGGCGGTTCTGGCGTCACATCGGCCATGGAGGCGAGGACCTCGTGGATCATGCCGTTCACTGCCGGCGGCTTTCTGCACATCGCTCTCGTCACCGTTCTTCCGGACCTGCTCGAAGAGGAGGACAAGATCGAGTCGCTGAAGCAGCTGGGCGCACTCGTGCTCGGCATTTTCGTGATGGCTGCACTCACAATCACGCTCGAGCAT
Protein: 354 (aa)
MNSSMDALTTILDLYVPEYITAYVKTIHYVPWLFSLLGSALIGLSGILPLIIIPSVEPGKESEMKNPADSKFLKTLLSFAVGGLLGDVFLHLLPEAWEYDMKERANSGDEHPSIRSGMWVLSGVLIFTIVEKIFSGYANADENNPQPKCVEIANCLMRRNGGKLPEGATTCAPNGSCDIEDIPNGCFLAAEKDKKGKEQSSKKVAGYLNLLANSIDNFTHGLAVAGSFLVSMRHGILATFAILLHEIPHEVGDFAILLRSGFTRWDAAKAQLLTATAGLMGALVAIGGSGVTSAMEARTSWIMPFTAGGFLHIALVTVLPDLLEEEDKIESLKQLGALVLGIFVMAALTITLEH
| Type | Start | End | Length |
| CDS |
3066 |
3805 |
740 |
| CDS |
4218 |
4340 |
123 |
| CDS |
4899 |
5097 |
199 |
| intron |
3806 |
4217 |
412 |
| intron |
4341 |
4898 |
558 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001357652 |
GA20606 [Drosophila pseudoobscura pseudoobscura] ref|XP_002020510.1| GL13475 [Drosophila persimilis] gb|EAL26786.1| GA20606 [Drosophila pseudoobscura pseudoobscura] gb|EDW39322.1| GL13475 [Drosophila persimilis] |
1e-145 |
| InterPro |
IPR003689 |
Zinc/iron permease |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(BP) |
GO:0030001 |
metal ion transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0046873 |
metal ion transmembrane transporter activity |
|
| Pfam |
PF02535.17 |
ZIP Zinc transporter |
8.9e-56 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL016969-PA |
| H. sapiens |
ENSP00000435076 |
| H. sapiens |
ENSP00000432302 |
| B. mori |
BGIBMGA002345-TA |
| P. humanus |
PHUM433950-PA |
| H. sapiens |
ENSP00000435845 |
| P. vanderplanki |
Pv.12458 |
| H. sapiens |
ENSP00000437186 |
| S. invicta |
SI2.2.0_11863 |
| A. mellifera |
GB12620-PA |
| N. vitripennis |
NV11516-PA |
| H. sapiens |
ENSP00000346956 |
| A. aegypti |
AAEL014762 |
| M. musculus |
ENSMUSG00000002105 |
| H. sapiens |
ENSP00000432499 |
| H. sapiens |
ENSP00000354689 |
| H. sapiens |
ENSP00000434290 |
| C. quinquefasciatus |
CPIJ001666 |
| D. plexippus |
DPOGS209857PA |
| T. castaneum |
TC012751 |
| A. gambiae |
AGAP003300 |
| H. sapiens |
ENSP00000434684 |
| D. melanogaster |
FBgn0039714 |