MidgeBase gene description page [Pn.06202]
Outline
| Gene ID | Pn.06202 |
| Type | Protein coding gene |
| Scaffold | PnScaf5539 |
| Start | 286 |
| End | 8591 |
| Direction | - |
Sequence
Transcript: 2574 (bp)
ATGTGTTGTCTTACAAACAATATCTATGACTACTTCAATGTGTCACAGGGTAAAATTACCATTCCCGGTATTGATGACGGTGAAGAATGTCAAATGACAGATGAAGCCTTCAACATCTTGGGTTTCACTCAAACCGAGAAGGACGATGTCTACAAGATCACTGCCGCTGTCATGCACATGGGTGCCATGCAGTTCAAGCAAAGAGGTCGCGAGGAGCAGGCTGAGGCTGATGGCGTCGAGGCTGGTGAGAAGGTCGCCAAGTTGCTCGGTGTCGACACCCAAGATCTCTACAAGAACTTGCTTAAGCCACGTATCAAGGTCGGTAACGAGTTCGTCACACAAGGTCGTAACAAGGACCAAGTCTACAACTCCGTCGGTGCCCTCTGCAAGGGTATCTTCGATCGTCTCTTCAAGTGGCTCGTCAAGAAGTGTAACGAGACCCTTGACACCAAGCAAAAGCGTGCTCACTTCATCGGTGTGCTGGATATTGCTGGTTTCGAGATTTTCGACTACAACGGCTTCGAACAATTGTGTATTAACTTCACCAATGAGAAACTCCAACAATTCTTCAACCATCACATGTTCGTCTTGGAACAAGAAGAATACAAGAAGGAGGGTATCAATTGGGCTTTCATTGATTTCGGCATGGACTTGTTGGCTTGCGTTGAGCTTATCGAAAAGTTCAATGGTTTCGAACAATTGTGTATCAACTTCACGAATGAGAAACTGCAGCAGTTTTTCAATCATCACATGTTCGTACTCGAGCAAGAGGAGTACACGAAGGAGGGCATCGAATGGGCCTTCATAGATTTCGGCATGGACCTCCAGCAGTGTATTGAGATGATTGAGCGATACAACGGTTTCGAACAATTGTGTATCAACTTCACCAACGAGAAGTTGCAACAATTCTTCAACCATCACATGTTCGTTCTTGAGCAAGAAGAATACAAGAAAGAGGGTATCGATTGGGCTTTCATTGATTTCGGCATGGACTTGTTGGCTTGTATTGAGATGATTGAGAAGTACAATGGTTTCGAACAATTGTGTATCAACTTCACAAACGAGAAGTTGCAGCAGTTCTTTAACCATCACATGTTCGTCTTGGAGCAAGAGGAGTACACACGCGAAGGTATCGAATGGACCTTCATTGATTTCGGTTTGGATTTGGCCTCGTGTATTGAGATGATTGAGAAGTACAACGGCTTCGAACAATTGTGTATTAACTTCACCAACGAGAAGCTCCAACAATTCTTCAACCACCACATGTTCGTTCTCGAACAAGAAGAATATAAGCGCGAGGGTATCGAGTGGACCTTCATCGATTTCGGCATGGACTTGCAACAGTGTATTGACTTGATCGAAAAGTACAACGGCTTCGAACAGTTGTGTATTAATTTCACAAACGAGAAATTGCAACAATTCTTCAACCACCACATGTTCGTTCTCGAACAAGAAGAGTATCAGCGTGAAGGTATCGAATGGACCTTCATCGATTTCGGCATGGATTTGCAAACGACAATCGATTTGATTGAAAAGCCTATGGGTATCTTGTCAATTCTTGAGGAAGAATCTATGTTCCCGAAAGCCACTGATCAAACCTTCGCCGAGAAGTTGATGGTCAACCATTTGGGCAAGTCATCACCATTCTTGAAGCCAAAACCACCAAAGCCAGGTTGCCAAGCTGGTCACTTCGCCATTGCGCATTACGCCGGTGTTGTCACATACAACATCACCGGTTGGTTGGAAAAGAACAAGGATCCATTGAACGACACTGTCGTTGATCAATTCAAGAAGGGCTCGAACGCTCTCTTGATTGAGATCTTCGCTGACCATCCAGGTCAATCAGGCGGTGCTGATACTGGCGGCAAGGGCGGTCGCGGTAAGAAGGGTGGTGGTTTCGCCACTGTCTCCTCATCATACCGTGAGCAGTTGAACAACTTGATGGCAACATTGCGCGCCACACATCCTCATTTCGTCCGTTGCATTATCCCCAACGAGTTGAAGCAGACCGGTCTCATCGATGCCAAGCTTGTTATGCATCAGCTCACTTGTAACGGTGTGCTTGAGGGTATCCGTATCTGTCGTAAAGGTTTCCCCAACAGAATGAACTACCCCGACTTCAAGTTGCGTTACAAGATCTTGGCTCCAGCCATCATGGATGCTGAGCCAAATCCCAAGGTCGCCACCGAAAAGTGTTTGGAAAGCACAACCCTCGACCCCGACTTCTATCGTATTGGTCACACCAAGGCGAGAATTTACATCTTCTTCTTTCTTCTCTGTTCTCTCTACCAAATTCTTGCCCCGCAAGAAATGTTCCACGAGAAGGATCCAAAGAAAGCCGCTCAATCGTGCTTCGATAAAGTCGGCCTCGATCCAGACTTCTATCGTATTGGACACACAAAGGCGAGCGAAGTTTACGATTACCAAATCCTTGCACCAGCCGCCATGCAAGCTGAAAAGGACCCAAAGAAGGCTGCTGGACTCTGTTTGGACGCCGTTAAATTAGACTCCGAACTTTATCGTTTGGGTCACACCAAGGTCAAAATTCTAAATTCAAAAAAAAAATCCACCCAC
Protein: 858 (aa)
MCCLTNNIYDYFNVSQGKITIPGIDDGEECQMTDEAFNILGFTQTEKDDVYKITAAVMHMGAMQFKQRGREEQAEADGVEAGEKVAKLLGVDTQDLYKNLLKPRIKVGNEFVTQGRNKDQVYNSVGALCKGIFDRLFKWLVKKCNETLDTKQKRAHFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGINWAFIDFGMDLLACVELIEKFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYTKEGIEWAFIDFGMDLQQCIEMIERYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIDWAFIDFGMDLLACIEMIEKYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYTREGIEWTFIDFGLDLASCIEMIEKYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIEWTFIDFGMDLQQCIDLIEKYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGMDLQTTIDLIEKPMGILSILEEESMFPKATDQTFAEKLMVNHLGKSSPFLKPKPPKPGCQAGHFAIAHYAGVVTYNITGWLEKNKDPLNDTVVDQFKKGSNALLIEIFADHPGQSGGADTGGKGGRGKKGGGFATVSSSYREQLNNLMATLRATHPHFVRCIIPNELKQTGLIDAKLVMHQLTCNGVLEGIRICRKGFPNRMNYPDFKLRYKILAPAIMDAEPNPKVATEKCLESTTLDPDFYRIGHTKARIYIFFFLLCSLYQILAPQEMFHEKDPKKAAQSCFDKVGLDPDFYRIGHTKASEVYDYQILAPAAMQAEKDPKKAAGLCLDAVKLDSELYRLGHTKVKILNSKKKSTH
| Type | Start | End | Length |
| CDS |
289 |
442 |
154 |
| CDS |
1720 |
1854 |
135 |
| CDS |
2045 |
2200 |
156 |
| CDS |
2311 |
2903 |
593 |
| CDS |
4062 |
4232 |
171 |
| CDS |
4685 |
4855 |
171 |
| CDS |
5394 |
5564 |
171 |
| CDS |
6101 |
6271 |
171 |
| CDS |
6574 |
6744 |
171 |
| CDS |
6930 |
7100 |
171 |
| CDS |
7221 |
7628 |
408 |
| CDS |
8490 |
8591 |
102 |
| intron |
443 |
1719 |
1277 |
| intron |
1855 |
2044 |
190 |
| intron |
2201 |
2310 |
110 |
| intron |
2904 |
4061 |
1158 |
| intron |
4233 |
4684 |
452 |
| intron |
4856 |
5393 |
538 |
| intron |
5565 |
6100 |
536 |
| intron |
6272 |
6573 |
302 |
| intron |
6745 |
6929 |
185 |
| intron |
7101 |
7220 |
120 |
| intron |
7629 |
8489 |
861 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003424097 |
PREDICTED: myosin heavy chain, muscle isoform 2 [Nasonia vitripennis] |
0.0 |
| InterPro |
IPR001609 |
Myosin head, motor domain |
|
| Gene Ontology(CC) |
GO:0016459 |
myosin complex |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0003774 |
motor activity |
|
| Pfam |
PF00815.15 |
Histidinol dehydrogenase |
0.095 |
| Pfam |
PF10982.3 |
Protein of unknown function (DUF2789) |
0.6 |
| Pfam |
PF00063.16 |
Myosin head (motor domain) |
1.9e-286 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.07732 |
| Pn.14667 |
| Pn.06285 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.07253 |
| N. vitripennis |
NV11782-PA |
| D. melanogaster |
FBgn0005634 |
| A. aegypti |
AAEL005656 |
| H. sapiens |
ENSP00000245503 |
| H. sapiens |
ENSP00000379616 |
| C. quinquefasciatus |
CPIJ000853 |
| C. quinquefasciatus |
CPIJ000848 |
| M. musculus |
ENSMUSG00000018830 |
| P. vanderplanki |
Pv.12016 |
| A. mellifera |
GB11965-PA |
| M. musculus |
ENSMUSG00000056328 |
| H. sapiens |
ENSP00000433944 |
| H. sapiens |
ENSP00000226207 |
| B. mori |
BGIBMGA014226-TA |
| H. sapiens |
ENSP00000300036 |
| A. aegypti |
AAEL005733 |
| T. castaneum |
TC005513 |
| P. humanus |
PHUM098460-PA |
| H. sapiens |
ENSP00000255381 |
| T. castaneum |
TC005924 |
| H. sapiens |
ENSP00000347507 |
| H. sapiens |
ENSP00000379539 |
| H. sapiens |
ENSP00000386041 |
| H. sapiens |
ENSP00000269243 |
| H. melpomene |
HMEL005802-PA |
| H. sapiens |
ENSP00000273353 |
| D. plexippus |
DPOGS215054PA |
| A. gambiae |
AGAP010147 |
| H. sapiens |
ENSP00000226209 |
| H. sapiens |
ENSP00000252172 |
| M. musculus |
ENSMUSG00000033196 |
| M. musculus |
ENSMUSG00000057003 |
| P. humanus |
PHUM344210-PA |
| H. sapiens |
ENSP00000366169 |
| H. melpomene |
HMEL017127-PA |
| A. mellifera |
GB18335-PA |
| M. musculus |
ENSMUSG00000020900 |
| A. mellifera |
GB12937-PA |
| M. musculus |
ENSMUSG00000092009 |
| H. sapiens |
ENSP00000407879 |
| P. vanderplanki |
Pv.10334 |
| M. musculus |
ENSMUSG00000074652 |
| A. gambiae |
AGAP007523 |
| M. musculus |
ENSMUSG00000060180 |
| H. sapiens |
ENSP00000345136 |
| M. musculus |
ENSMUSG00000040752 |
| C. quinquefasciatus |
CPIJ015899 |
| D. melanogaster |
FBgn0264695 |
| H. sapiens |
ENSP00000404570 |
| M. musculus |
ENSMUSG00000053093 |
| B. mori |
BGIBMGA014227-TA |
| A. aegypti |
AAEL001411 |
| D. plexippus |
DPOGS206365PA |
| H. sapiens |
ENSP00000380367 |
| H. sapiens |
ENSP00000406273 |
| S. invicta |
SI2.2.0_10357 |
| H. sapiens |
ENSP00000464317 |
| H. sapiens |
ENSP00000384330 |
| C. quinquefasciatus |
CPIJ000849 |
| H. sapiens |
ENSP00000353590 |
| H. sapiens |
ENSP00000348634 |
| H. sapiens |
ENSP00000459873 |
| M. musculus |
ENSMUSG00000020908 |
| H. sapiens |
ENSP00000216181 |
| H. sapiens |
ENSP00000407821 |
| S. invicta |
SI2.2.0_00390 |
| H. sapiens |
ENSP00000458731 |
| H. sapiens |
ENSP00000369315 |
| H. sapiens |
ENSP00000262873 |
| H. sapiens |
ENSP00000262269 |