MidgeBase gene description page [Pn.06133]
Outline
| Gene ID | Pn.06133 |
| Type | Protein coding gene |
| Scaffold | PnScaf5433 |
| Start | 11940 |
| End | 13564 |
| Direction | - |
Sequence
Transcript: 753 (bp)
ATGATTACAATACCGGAGTTTTATCGTAATCGAGATATTTTCATAACAGGCGCTACGGGTTTCATCATGAAAGTGCTAATTGAAAAACTATTTCGTTCGTGCAGCGATGTCGGGCGAATTTTCATTCTGCTGAGAGAAAAACGCTCGAAATCAATCAGTGAGCGGTTGGAAGAAATTAAAAACATGCCCCTCTTTAAGCTTGTCATGGAGAAGAATCCGGAAGTTTTCGAGAAGCTCATTCCAGTCGAGGGCGATGTGTTGCTCGTTGGCATGGGACTGAGCGCTGAGACGCGCGACATGCTCAGGAATGTGTCGGTCGTGTTTCACTCGGCAGCGTCGGTGCGCTTCGATGACAATCTGCAAGATGCACTGCTTCTCAACACGCGAGGCACTCACGAGGTCGTCAAGTTTGCACTCACGCTCGAGCGCCTGGTTTCCTTCGTTCACGTCTCGACGACTTACTGCTACCCGAACAGAGACTGCACCGACGAGGTTGTGTACCCGATGGAGTGCGACTGGCGCAAGACCATCGAAATTGCCGAGAAGATGGATGTGGAGATGCTGGAGTGCTTCATGCCGCACTACACGGGCTTCATGCCCAACACTTATGTCTTCACGAAGGCACTCGCCGAGCAGGTGTGCGACAGCTATAAAAGTCAATTGCCGATCACCATCGTGCGGCCGTCAATTGTCGTCGGAACGGAACTCGAGCCCTTCGGCGGATGGTGCGACAATTTTAATGGCCCGGGTGAG
Protein: 251 (aa)
MITIPEFYRNRDIFITGATGFIMKVLIEKLFRSCSDVGRIFILLREKRSKSISERLEEIKNMPLFKLVMEKNPEVFEKLIPVEGDVLLVGMGLSAETRDMLRNVSVVFHSAASVRFDDNLQDALLLNTRGTHEVVKFALTLERLVSFVHVSTTYCYPNRDCTDEVVYPMECDWRKTIEIAEKMDVEMLECFMPHYTGFMPNTYVFTKALAEQVCDSYKSQLPITIVRPSIVVGTELEPFGGWCDNFNGPGE
| Type | Start | End | Length |
| CDS |
11943 |
12506 |
564 |
| CDS |
13376 |
13564 |
189 |
| intron |
12507 |
13375 |
869 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001862417 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS37022.1| conserved hypothetical protein [Culex quinquefasciatus] |
2e-80 |
| InterPro |
IPR016040 |
NAD(P)-binding domain |
|
| InterPro |
IPR013120 |
Male sterility, NAD-binding |
|
| Gene Ontology(MF) |
GO:0000166 |
nucleotide binding |
|
| Pfam |
PF01370.16 |
NAD dependent epimerase/dehydratase family |
6.4e-10 |
| Pfam |
PF01073.14 |
3-beta hydroxysteroid dehydrogenase/isomerase family |
0.00076 |
| Pfam |
PF13460.1 |
NADH(P)-binding |
0.0078 |
| Pfam |
PF02719.10 |
Polysaccharide biosynthesis protein |
0.00026 |
| Pfam |
PF07993.7 |
Male sterility protein |
1.6e-57 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL005296 |
| A. aegypti |
AAEL005300 |
| C. quinquefasciatus |
CPIJ004392 |
| A. aegypti |
AAEL005299 |
| A. aegypti |
AAEL013911 |
| A. gambiae |
AGAP004784 |
| A. aegypti |
AAEL013912 |
| A. aegypti |
AAEL013910 |
| P. vanderplanki |
Pv.11001 |
| C. quinquefasciatus |
CPIJ004393 |