MidgeBase gene description page [Pn.06132]
Outline
| Gene ID | Pn.06132 |
| Type | Protein coding gene |
| Scaffold | PnScaf5433 |
| Start | 10216 |
| End | 11491 |
| Direction | - |
Sequence
Transcript: 597 (bp)
ATGTCGCTCAAATTGCTCGTCTACGACGGCGCCTACTCGGTGCGGAAGACTCCGTTCGAGAAGCTCGTGTACTTGCCGGGCGGCGGCGTGACTTTATGCAAATTCATGAACTATTTCCGAATTGTGTGCTTCCAACTCGCGCCGGCCGCTCTAATTGATCTATTTTTGAAGCTGAGCGGAAAGAAGCAATTCTTGCTCTCGCTCCAGCGGAAAATTGCACACGCAAGCAGTGCACTAAAGACATTCGTGCACTCCGAGTGGAACTTTGGTGTCGACAATTTTCAGAAATTGCGAAAGAATCTGCTGCCCGAGGACTCTGAAACTTTCAGCTTGGACCGGAAAATTGTCAGCAGTCTTGAGTATTACGAAGTTCAGATTCTAGGCGCACGGAGATATCTCTTGAAGGAATCGGATTCAACACTTCCGGCGTGTCGACGAAGGATCAAATACATTTTAATATTCGACAGATTTATACGCATCATTTTGTTCGGCTACATCTTTTATTTGCTCGCAAGGAAATTCAATGTATTTAGTGAGATTGAAGGGCCGCTTGCGAACGATACAAATCGCTCGCTCCGAGAGATGGGAGAGACAATC
Protein: 199 (aa)
MSLKLLVYDGAYSVRKTPFEKLVYLPGGGVTLCKFMNYFRIVCFQLAPAALIDLFLKLSGKKQFLLSLQRKIAHASSALKTFVHSEWNFGVDNFQKLRKNLLPEDSETFSLDRKIVSSLEYYEVQILGARRYLLKESDSTLPACRRRIKYILIFDRFIRIILFGYIFYLLARKFNVFSEIEGPLANDTNRSLREMGETI
| Type | Start | End | Length |
| CDS |
10219 |
10433 |
215 |
| CDS |
10673 |
10737 |
65 |
| CDS |
11027 |
11152 |
126 |
| CDS |
11226 |
11296 |
71 |
| CDS |
11372 |
11491 |
120 |
| intron |
10434 |
10672 |
239 |
| intron |
10738 |
11026 |
289 |
| intron |
11153 |
11225 |
73 |
| intron |
11297 |
11371 |
75 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001845979 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS42239.1| conserved hypothetical protein [Culex quinquefasciatus] |
2e-29 |
| InterPro |
IPR004262 |
Male sterility |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Pfam |
PF03015.14 |
Male sterility protein |
9.4e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes