MidgeBase gene description page [Pn.06073]
Outline
| Gene ID | Pn.06073 |
| Type | Protein coding gene |
| Scaffold | PnScaf5354 |
| Start | 314 |
| End | 1000 |
| Direction | + |
Sequence
Transcript: 684 (bp)
ATGGCGCAGGTCGCTCTTCACATGCAGTTCGGTGGCGGCACCGGTCTTTGCGGCGGCTCAGTTCTCACAATCCGCTCGGTGCTCACCGCTGCTCACTGCCCAGTCGGCTCACAGTCGACTTTGGTCATCGCCGGCGCTCACAACCGCAACATCAACGAGCCCTTGCAGCAGCGCCGCAGCGTTCCTTCGGCCAACTACCGCATCCACCAGAACTACAACCCGAACAACCTCAACAACGACATCGCCATCCTGATCACGCCCACGCCCAACTTCTCGTGGACCAACGCCGTCCAGCCGACCCGCCTCCCCACCGCCTTCGCGAACGAGCTCTTCGTCGGCGAGACCGCGCGCTCGACCGGCTGGGGCCGCACCACAAACACCGGCGCCACTTCGGCCGTCCTCCGCAAGGCCTACAACCCCGTCATCACCAACGCCGCCTGCGCCTCGGTCTTCGGCAACTCAGTGGTCGTCCCGTCCGTCATCTGCATCGCCACCGCTGGCGTCAATCAGGGCACGTGCAACGGAGATTCGGGCGGCGTTTTGTCGGTTCCTCGTGCTGGCGGCGGTCCCGTTCAGATCGGTGTCACCTCGTTCGTCGCCTCTGCCGGCTGCGTCGCTGGTCTGCCTTCGGGCTTCGCTCGCACCACCAGCTTCCTCACCTGGATCAACAACAACCAGAACCCA
Protein: 228 (aa)
MAQVALHMQFGGGTGLCGGSVLTIRSVLTAAHCPVGSQSTLVIAGAHNRNINEPLQQRRSVPSANYRIHQNYNPNNLNNDIAILITPTPNFSWTNAVQPTRLPTAFANELFVGETARSTGWGRTTNTGATSAVLRKAYNPVITNAACASVFGNSVVVPSVICIATAGVNQGTCNGDSGGVLSVPRAGGGPVQIGVTSFVASAGCVAGLPSGFARTTSFLTWINNNQNP
| Type | Start | End | Length |
| CDS |
314 |
997 |
684 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_556312 |
AGAP005663-PA [Anopheles gambiae str. PEST] gb|EAL39883.2| AGAP005663-PA [Anopheles gambiae str. PEST] |
3e-47 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
7.8e-39 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes