MidgeBase gene description page [Pn.06015]
Outline
| Gene ID | Pn.06015 |
| Type | Protein coding gene |
| Scaffold | PnScaf5331 |
| Start | 10016 |
| End | 20933 |
| Direction | + |
Sequence
Transcript: 378 (bp)
ATGATCGCCTCAACAAATGGCTTACAATGTTACCAGTGCGGCCAATTTAATGACGGTGTTGGTTCCATCACACCGTGTCTCAACTACACCGAGACAAACGCTCACTTCTATCTCAAGGATTGCCCGAGACGAACCGACAAGTTCTGCGTGGCCTCAATTGATTTCCAATTAGGGGAAATTCTCGATGCTCTCGAACTCTCCAATCCTCTCGAAATCAACGCAGACATTCTCAAGACTCCTGCAAGCTTTCGTAATGTTCCTGTCAATTCGAAGGAAGTCATCTTCTTCATAATCCCTGCTGCTCTCGGTCAAGAGATTCCATGTGTGTGCAAATTGCTCGAGGTCTTTCGGTTGATTGACGAGGTTCGCACGGCGCTT
Protein: 126 (aa)
MIASTNGLQCYQCGQFNDGVGSITPCLNYTETNAHFYLKDCPRRTDKFCVASIDFQLGEILDALELSNPLEINADILKTPASFRNVPVNSKEVIFFIIPAALGQEIPCVCKLLEVFRLIDEVRTAL
| Type | Start | End | Length |
| CDS |
10016 |
10165 |
150 |
| CDS |
20703 |
20930 |
228 |
| intron |
10166 |
20702 |
10537 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002031922 |
GM26271 [Drosophila sechellia] gb|EDW42908.1| GM26271 [Drosophila sechellia] |
3e-12 |
| Pfam |
PF10223.4 |
Uncharacterized conserved protein (DUF2181) |
0.065 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB17821-PA |
| B. mori |
BGIBMGA002320-TA |
| D. plexippus |
DPOGS203085PA |
| D. melanogaster |
FBgn0037676 |
| N. vitripennis |
NV22269-PA |