MidgeBase gene description page [Pn.05965]
Outline
| Gene ID | Pn.05965 |
| Type | Protein coding gene |
| Scaffold | PnScaf5299 |
| Start | 49119 |
| End | 51416 |
| Direction | - |
Sequence
Transcript: 1749 (bp)
ATGAAGCACCCGCACATGAGTCGTAACACGGCAATAGCCACCAGTGTCTTTGTAGTTTTCATCGTCTCGCTCGGGTTTCTGCTCTGGTACGCATACGACCAAGGCTACATCGACGATGGAATGTCGACCGCTGCGGTTGCAACGACAGCCGACCAGTGCACGGACGCTGCAGTGAGGATACTGCGGAAGGGCGGTTCGGCTGCCGATGCCGCAGTAGCTGCTTCCTTCTGCCAGGGAGTCGTCGTGCCGCAGGCTGCCGGCATCGGTGGCGGTTTTCTGGCGACAATCTACATAAAAGAGACTCACACCATCGAGACAATGAACGCACGCGAAGTGGCTCCGTTGAGGGCGACACAGGAAATTTATTTGGAAAATAATTCGACGCTCAGCGACGAGGGCGGACTATCGATTGCTGTGCCGACCGAAGTGAAGGGCCTGTACGAGCTACACAGACGCTACGGACATTTGCGCTGGAGCGAAGTCATCGAGCCCGCAATTGAAGTGGCAGAGAAAGGCTTTAAAGTACCAATGTATTTGGCAAACGTACTCGCAGGTCGAGAGGAGAAGATAAGGAGCACCAATGGCTTCAAAGATTTGTACGTCAATCCGGAAACTGGTGATGTTTATCGCGAGGGTGACACTCTCAAAAATCCCAAATTGGCAGAAACATTAAAGATAATTGCGCGTGAGGGAGCCGATGCGATTTACAGCAGTCGCGGTTCGTTGGGCCAAAAGCTCGTCGACGAGATTCAAGCACATGGCGGCTTAGTTACGATGGATGATTTGAGAATTTATCAGCCGAAATTTGCACCATCTGTGTCGACGAAGCTCTACCAAGGCGATACTCTGCACACCACGCCCGTGCCCTCATCTGGCTGCGTGCTTGCGTTCATATTAAACATTCTCGAGGGCTACGAGTTGCACAAGGAGTCGTACGAGTTTCATCGTGGCGATAAATTAATTTATCACCGAATTGTAGAGGCATTTAAATTCGGCTTCGGCATGCGAACGCGCCTCGGCGACGAGATTTCGCTCGACGTTGTCGAGGCCGTGAAGAACTTGCTCGACACCGACTTTGCCAGCGAGATTCGAACGCTCATCGACGACTCGACGACCTTTAATGACACACAGCACTATTTGTTCAACTCCTCTGTGACGGTCGATCATGGCACAGGTCACATTTCGATTTTGGCGCCAAACGGTGATGCTGTCGCACTCACATCGACGATTAATTCGGTCATGGGCTCGTGGATTATGTCGGAGAGCACGGGCATAATCTTTAATAACGAAATGGATGACTTTTCATTACCGACAGCCTCAGATGGCCTGCTCGAATCGCCCGCGAATTTCATCAAGCCCGGCAAAAGTCCGATGTCATCGATGGCGCCGATAATTCTGCTCAACGAACACAACGAGGTGACAATGGTCGCAGGTGGTGCAGGCGGAATTCTCATCATAACGTCGCTCGTGCTTTTCTTCGTCCACGTTTTGTACTTGAGTCAAACAATGGACACGGCGCTGGCAATGAAACGCTTTCATCATCAGCTGGAGCCGATGTACGTTCGATTCGAGGACGGCTACGACCAACCGGACATTGTCGAGTTCCTGCGTGAGCGAGGTCATGGAACGGCGAACGCTCGACCCATACTTTCCGCCTTCGCATCGATCATCGCCGTGTCGAACAGAAACGGGCACGTCGAAACGGCAATTGACCCGCGGCGAGGTGGAAAGGGAGTCATTTTCAATCTT
Protein: 583 (aa)
MKHPHMSRNTAIATSVFVVFIVSLGFLLWYAYDQGYIDDGMSTAAVATTADQCTDAAVRILRKGGSAADAAVAASFCQGVVVPQAAGIGGGFLATIYIKETHTIETMNAREVAPLRATQEIYLENNSTLSDEGGLSIAVPTEVKGLYELHRRYGHLRWSEVIEPAIEVAEKGFKVPMYLANVLAGREEKIRSTNGFKDLYVNPETGDVYREGDTLKNPKLAETLKIIAREGADAIYSSRGSLGQKLVDEIQAHGGLVTMDDLRIYQPKFAPSVSTKLYQGDTLHTTPVPSSGCVLAFILNILEGYELHKESYEFHRGDKLIYHRIVEAFKFGFGMRTRLGDEISLDVVEAVKNLLDTDFASEIRTLIDDSTTFNDTQHYLFNSSVTVDHGTGHISILAPNGDAVALTSTINSVMGSWIMSESTGIIFNNEMDDFSLPTASDGLLESPANFIKPGKSPMSSMAPIILLNEHNEVTMVAGGAGGILIITSLVLFFVHVLYLSQTMDTALAMKRFHHQLEPMYVRFEDGYDQPDIVEFLRERGHGTANARPILSAFASIIAVSNRNGHVETAIDPRRGGKGVIFNL
| Type | Start | End | Length |
| CDS |
49122 |
49429 |
308 |
| CDS |
49497 |
49699 |
203 |
| CDS |
49772 |
50419 |
648 |
| CDS |
50827 |
51416 |
590 |
| intron |
49430 |
49496 |
67 |
| intron |
49700 |
49771 |
72 |
| intron |
50420 |
50826 |
407 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR23232 |
hypothetical protein AND_13289 [Anopheles darlingi] |
1e-128 |
| InterPro |
IPR000101 |
Gamma-glutamyltranspeptidase |
|
| Gene Ontology(MF) |
GO:0003840 |
gamma-glutamyltransferase activity |
|
| Pfam |
PF01019.16 |
Gamma-glutamyltranspeptidase |
1.4e-152 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.12686 |