MidgeBase gene description page [Pn.05782]
Outline
| Gene ID | Pn.05782 |
| Type | Protein coding gene |
| Scaffold | PnScaf5139 |
| Start | 18397 |
| End | 20421 |
| Direction | - |
Sequence
Transcript: 1527 (bp)
ATGATGCTCTACATAGTGGTAGCAGTCGTCACGGCGATTTTTCTCATCCACTTTTTATATCGCGATGCGAAAAAGCCGAAAAACTTTCCGCCCGGGCCGTTTTTCTATCCGATCGTAGGCAGTGCTTTGAGCATTGTTAACGCCCGCAAGCGGACGGGCATGCTTGCGAACGGAGTCGCCGAAATTGCGAGCAAATATCCCGGAGCGAAGGATGTCGTGGGTTTCAAGGTGGGCAAGGATCGCGTGGTGTTTACCATCTCATCACGAGCCTTCTTCGACTTCTACACGAATCCAGATCTCGACGCGCGTCCTTTTGGGCCGTTTTATGAGACAAGGACGTGGAATCTACGCCGTGGGATAATTTTTACTGATTCAGATTTCTGGCACGTCCAACATCGCTTCGTTCTGCGGCAGCTGAAGGAATTTGGCTTCGCACGGAAGGGCATGGTCGAGATGTGCGAGAGCGAAGCCGAGTTTTGCGTCAACGATTTTCGCAAGCTGATTGAGAGTCGCGGTGGCACAAGGGCGACTGTCAAAATGCCGAACCTCCTCAGTCTGTACGTCCTGAACACGCTATGGCAGTTCATTGCCGGCGTGCGCTACGACGTGAGTGACGGGCAGCTGAGGCACTTGCAGAACATGCTGAGCGATTTGTTCAAGTCGATCGACATGCAGGGCACTTTGTTCTCGCACTTTCCGTTCCTTCAGTACCTCGCGCCCGAGGCATCCGGCTACAACCGCTTCGTGATTTTCCACAAGAATTTGCATGCGTTTACGGCGCGGGAAGTCGAACGGCACAAGAAGAACTTCAACCCGTCGGACGAGCCGCGCGACCTCATCGAGGCTTACCTGCGCGTTCTCTACTCTGGCGACGACAGCGGCAGCAAGCCTCACGAATCTTTCAGCGAGCAGCAGTTGCTCGCCATCATGCTTGACATGTTCATTGCCGGCTCCGAAACGACCAGTCAGGCCTTCAACTTCATGTTCCTGCACCTTGTTCGTAATCCGCAAATTCAGCAGCGCGCCTTCGAAGAAATCGACAGAGTCGTTGGACAGCAGCGACTTCCCCGGCTCTCCGATCGTCCCAATCTTCCCTACTGCGAGGCAATTGTGTACGAAGCGGCGCGAGCATTCACCACAAACGTTCTCGGCATCGCCCATCGAGCGTACAGAGACACAAAGCTCTGCGGCTACGACATCCCCAAAGACACAATGATCATATCAACCTTCCGAAATGTCAACCTCGACCCGACCGTGTTCAAGAGGCCGCACGACTTCCATCCGGAAAACTTTCTCGACGACAACGGCAGACTTTCGATTCCCGAGAACTTTTATCCGTTCGCATTAGGCAAGCATCGATGTATCGGTGAAATGTTGGCCAAATGCAATCTCTTTCTGTTCTTGACGGCCCTCGTTCAAAACTTCTTTTTCGCCGTACCAGAAGGTCATGCGAGGCCATCCGATGAGCCGGCAGAGGGCTGCACTCCGACCGTAAAAGACTACGAGGCTCAAATTGTCTTCAGAAAT
Protein: 509 (aa)
MMLYIVVAVVTAIFLIHFLYRDAKKPKNFPPGPFFYPIVGSALSIVNARKRTGMLANGVAEIASKYPGAKDVVGFKVGKDRVVFTISSRAFFDFYTNPDLDARPFGPFYETRTWNLRRGIIFTDSDFWHVQHRFVLRQLKEFGFARKGMVEMCESEAEFCVNDFRKLIESRGGTRATVKMPNLLSLYVLNTLWQFIAGVRYDVSDGQLRHLQNMLSDLFKSIDMQGTLFSHFPFLQYLAPEASGYNRFVIFHKNLHAFTAREVERHKKNFNPSDEPRDLIEAYLRVLYSGDDSGSKPHESFSEQQLLAIMLDMFIAGSETTSQAFNFMFLHLVRNPQIQQRAFEEIDRVVGQQRLPRLSDRPNLPYCEAIVYEAARAFTTNVLGIAHRAYRDTKLCGYDIPKDTMIISTFRNVNLDPTVFKRPHDFHPENFLDDNGRLSIPENFYPFALGKHRCIGEMLAKCNLFLFLTALVQNFFFAVPEGHARPSDEPAEGCTPTVKDYEAQIVFRN
| Type | Start | End | Length |
| CDS |
18400 |
18838 |
439 |
| CDS |
18984 |
19695 |
712 |
| CDS |
20046 |
20421 |
376 |
| intron |
18839 |
18983 |
145 |
| intron |
19696 |
20045 |
350 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001850658 |
cytochrome P450 [Culex quinquefasciatus] gb|EDS32427.1| cytochrome P450 [Culex quinquefasciatus] |
1e-163 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
4.7e-86 |
| Pfam |
PF00714.12 |
Interferon gamma |
0.036 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV16441-PA |
| C. quinquefasciatus |
CPIJ800157 |
| A. mellifera |
GB18872-PA |
| T. castaneum |
TC002542 |
| D. plexippus |
DPOGS203324PA |
| S. invicta |
SI2.2.0_13260 |
| D. melanogaster |
FBgn0001992 |
| P. humanus |
PHUM539320-PA |
| P. vanderplanki |
Pv.10525 |
| A. gambiae |
AGAP010077 |
| H. melpomene |
HMEL007289-PA |
| B. mori |
BGIBMGA002085-TA |
| A. aegypti |
AAEL012144 |