MidgeBase gene description page [Pn.05675]
Outline
| Gene ID | Pn.05675 |
| Type | Protein coding gene |
| Scaffold | PnScaf5009 |
| Start | 3586 |
| End | 4792 |
| Direction | + |
Sequence
Transcript: 516 (bp)
ATGCAATTAGGTGCTAAAGAAACAGAAAATGAACGTTTTTCTCACTATTTTACAAAAACCTACAGAAAAACAGCATCACTCATCGCGAACGCGTGCAAAGGGTCAGCTACAATTGCGGGAGCCGATGCACCAATTGTCGAGACTGCGTTTCTCTATGGAAAAAACCTCGGTCTAGCCTTTCAATTTGTCGACGATCTTTTGGACTTTGTATCATCTTCCGAGACGATGGGTAAGCCCGCAGCTGCTGACTTAAAACTTGGTCTCGCAACAGCACCCGTTCTATTTGCCTGCGAAAAGTATCCTGAACTAAATCCGATGATTATGAGACGCTTTAAGGAGCCTGGTGATGTCGAAAAGGCGTTTGAATTAGTGCATAAATCGCAGGGACTCGAACAGACACGCTTTTTGGCTCGAAAACACTGCCTCGAAGCCATTAAACTAGCAAACAAATTAGCTGAATCACCATACCAAAAGGGACTCACAGACATAATGGACTTGGTGCTGAATCGAATGAAA
Protein: 172 (aa)
MQLGAKETENERFSHYFTKTYRKTASLIANACKGSATIAGADAPIVETAFLYGKNLGLAFQFVDDLLDFVSSSETMGKPAAADLKLGLATAPVLFACEKYPELNPMIMRRFKEPGDVEKAFELVHKSQGLEQTRFLARKHCLEAIKLANKLAESPYQKGLTDIMDLVLNRMK
| Type | Start | End | Length |
| CDS |
3586 |
3687 |
102 |
| CDS |
3744 |
3938 |
195 |
| CDS |
4571 |
4789 |
219 |
| intron |
3688 |
3743 |
56 |
| intron |
3939 |
4570 |
632 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661265 |
trans-prenyltransferase [Aedes aegypti] gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti] |
3e-80 |
| InterPro |
IPR008949 |
Terpenoid synthase |
|
| InterPro |
IPR017446 |
Polyprenyl synthetase-related |
|
| InterPro |
IPR000092 |
Polyprenyl synthetase |
|
| Gene Ontology(BP) |
GO:0008299 |
isoprenoid biosynthetic process |
|
| Pfam |
PF00348.12 |
Polyprenyl synthetase |
2.2e-22 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000026784 |
| T. castaneum |
TC000408 |
| A. aegypti |
AAEL002287 |
| H. sapiens |
ENSP00000365376 |
| A. gambiae |
AGAP002069 |
| A. mellifera |
GB12648-PA |
| H. sapiens |
ENSP00000365388 |
| C. quinquefasciatus |
CPIJ008090 |
| D. plexippus |
DPOGS202015PA |
| P. vanderplanki |
Pv.16978 |
| S. invicta |
SI2.2.0_14286 |
| B. mori |
BGIBMGA012565-TA |
| D. melanogaster |
FBgn0051005 |
| H. melpomene |
HMEL016759-PA |
| A. gambiae |
AGAP000591 |
| N. vitripennis |
NV18793-PA |
| P. humanus |
PHUM260230-PA |