MidgeBase gene description page [Pn.05651]
Outline
| Gene ID | Pn.05651 |
| Type | Protein coding gene |
| Scaffold | PnScaf4976 |
| Start | 9170 |
| End | 10134 |
| Direction | - |
Sequence
Transcript: 777 (bp)
ATGATGCCTAACAGTGGAATGAACTTTGCTCCTCTCTGGCATAATGGACCGATGCCAGGAAGCTTCTACAATTTCCCTCAAAACAACGTAACTCCAAATTCGACTGCTACTGAGTATGGATTTCAAAGAAATAGCGGCCCAATTACAACGGGCACCTCAATCGTCGCCGTCAAGTACGATAAAGGCGTCATTATCGCAGGCGACAAGCTCGTCTCCTACGGAAATTTGGCCCGCTACCACAATGTCGATCGAGTATTCAAAATAAACGACAACATAATTTTGGGCATGAGCGGCGACTACGCAGACTTTCAGTTCATCAAGCAGTTCATCGACGAGACAATTCTCGCCGACTTCTCTGCCGACGACAAGATCGCTTTGAAGCCAAAAGACTTGTACACTTGGCTCACGAGAGTCCTGTACAATCGCCGCTCTCGCTTCAATCCTTTGTGGCTCGACATGGTTGTTGGCGGCATGCAGGACAACGAACCGTTCTTGGGACACATCAACGTTCGCGGACGCTCTTATACAAATGACGTCATTGCGACCGGCTACGGTACACATCTTGCGCTGCCTCTTCTTCGCGAGCACTCCGAGAAGGGAACTCTCGACGAGGCAACTGCATTGAAGGTCATCAAGAACTGCATGGAAGTTTTGTTTTATCGTGATTGCCGCGGCTATCCGAAATACTCGCAGGCCATCATAAATGCAAGTGGTGCAACCGTAAGTGATCACGAAGTTAATCAAAACTGGGATTTGGCTCTGAGTATCAAGGGTTAT
Protein: 259 (aa)
MMPNSGMNFAPLWHNGPMPGSFYNFPQNNVTPNSTATEYGFQRNSGPITTGTSIVAVKYDKGVIIAGDKLVSYGNLARYHNVDRVFKINDNIILGMSGDYADFQFIKQFIDETILADFSADDKIALKPKDLYTWLTRVLYNRRSRFNPLWLDMVVGGMQDNEPFLGHINVRGRSYTNDVIATGYGTHLALPLLREHSEKGTLDEATALKVIKNCMEVLFYRDCRGYPKYSQAIINASGATVSDHEVNQNWDLALSIKGY
| Type | Start | End | Length |
| CDS |
9173 |
9815 |
643 |
| CDS |
10001 |
10134 |
134 |
| intron |
9816 |
10000 |
185 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001844525 |
proteasome subunit beta type 4 [Culex quinquefasciatus] gb|EDS37646.1| proteasome subunit beta type 4 [Culex quinquefasciatus] |
1e-87 |
| InterPro |
IPR016050 |
Proteasome, beta-type subunit, conserved site |
|
| InterPro |
IPR016295 |
Proteasome endopeptidase complex, beta subunit |
|
| InterPro |
IPR001353 |
Proteasome, subunit alpha/beta |
|
| InterPro |
IPR023333 |
Proteasome B-type subunit |
|
| Gene Ontology(BP) |
GO:0051603 |
proteolysis involved in cellular protein catabolic process |
|
| Gene Ontology(CC) |
GO:0005839 |
proteasome core complex |
|
| Gene Ontology(MF) |
GO:0004175 |
endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0004298 |
threonine-type endopeptidase activity |
|
| Pfam |
PF00227.21 |
Proteasome subunit |
1e-30 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA009684-TA |
| A. mellifera |
GB19777-PA |
| A. aegypti |
AAEL007049 |
| A. gambiae |
AGAP012608 |
| A. gambiae |
AGAP011444 |
| H. melpomene |
HMEL011245-PA |
| P. vanderplanki |
Pv.00433 |
| H. sapiens |
ENSP00000290541 |
| D. plexippus |
DPOGS209852PA |
| T. castaneum |
TC008617 |
| P. humanus |
PHUM066580-PA |
| N. vitripennis |
NV11044-PA |
| C. quinquefasciatus |
CPIJ002907 |
| M. musculus |
ENSMUSG00000005779 |
| D. melanogaster |
FBgn0250746 |