MidgeBase gene description page [Pn.05632]
Outline
| Gene ID | Pn.05632 |
| Type | Protein coding gene |
| Scaffold | PnScaf4961 |
| Start | 14349 |
| End | 16393 |
| Direction | - |
Sequence
Transcript: 987 (bp)
ATGAAGAAGCTGCTGATTGCGTTAATTTTATTTTCGGCGACGGCATGGCGAGCGAATGCCGATGAGGACGACATGGAGTGGAATTGGGACGCCGGAATTCCGCACTACCAACATCCTCGCTACGACGACAACGGCAATTTGGTGTTTTTCCCTCGAATCATCGGCGGTCGGCCGGCAATGCCAGACGAGTTTCCGGCGAAGGTGTCGATTCAAACACGTCGCGGTGATCACTTTTGCGGTGGCGCTTTGCTGGATTTGAGGCACGTTCTGACGGCAGCTCACTGCCTTTTCGAACCAAACGGTCGTGTGACTCACCCGAATGAGATTCGACTGATGGCCGACGACCTCACCATCGACCACCGTGCATCGCCGTCGCGGCAAATCAGATTCGTGACGCACATCTTCCTGCACCCGGCCTACGATGACTTCACGTTCGCCAATGACATCGCGGTCATTCGAGTCTCGGTGCCGTTCATGCACACGCTGACGCTGAGAGCGATGCCGAGGTCGCGAGCTCCGCCAGCCGATAATGAGCTCTGCCATCTTGCCGGCTGGGGTGTCACGCACGAAATCCGCGTTCGACCGCATCCCGTCTTGCTGCGCGTTGAGCTCGACATCATCAGCATCGCCTTCTGCAACGGAACGAACTCATTTAACGGAAACATACCGTTCAACTCCTTCTGTGCCGGCTCGATGGATGGCTCGCGGGACGCCTGCTTTGGAGACTCGGGAGGTGGTCTGATGTGCAATAATCATATTGCCGGAGTCGTGTCATTTGGCTTTGGCTGCGGTCGACGTAATTTCCCCGGAGTGTATGTTGACGTGTCAGCATTTAATGCATGGATTGATCAATGCATTGCATCGAACATTGCCCATGAAGCCATCCCAACTCCCACCCAGCGCCCGGGATCCGGTTCGAGGTCTTCACCTCTACACCTCTACCTTCTTATCGTGTTGACACTCGCAATAACTAAATTTATCAACACG
Protein: 329 (aa)
MKKLLIALILFSATAWRANADEDDMEWNWDAGIPHYQHPRYDDNGNLVFFPRIIGGRPAMPDEFPAKVSIQTRRGDHFCGGALLDLRHVLTAAHCLFEPNGRVTHPNEIRLMADDLTIDHRASPSRQIRFVTHIFLHPAYDDFTFANDIAVIRVSVPFMHTLTLRAMPRSRAPPADNELCHLAGWGVTHEIRVRPHPVLLRVELDIISIAFCNGTNSFNGNIPFNSFCAGSMDGSRDACFGDSGGGLMCNNHIAGVVSFGFGCGRRNFPGVYVDVSAFNAWIDQCIASNIAHEAIPTPTQRPGSGSRSSPLHLYLLIVLTLAITKFINT
| Type | Start | End | Length |
| CDS |
14352 |
14430 |
79 |
| CDS |
14507 |
14648 |
142 |
| CDS |
14737 |
14778 |
42 |
| CDS |
14904 |
15073 |
170 |
| CDS |
15510 |
15739 |
230 |
| CDS |
15811 |
15881 |
71 |
| CDS |
15985 |
16053 |
69 |
| CDS |
16132 |
16278 |
147 |
| CDS |
16357 |
16393 |
37 |
| intron |
14431 |
14506 |
76 |
| intron |
14649 |
14736 |
88 |
| intron |
14779 |
14903 |
125 |
| intron |
15074 |
15509 |
436 |
| intron |
15740 |
15810 |
71 |
| intron |
15882 |
15984 |
103 |
| intron |
16054 |
16131 |
78 |
| intron |
16279 |
16356 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001862771 |
polyserase-2 [Culex quinquefasciatus] gb|EDS37463.1| polyserase-2 [Culex quinquefasciatus] |
1e-60 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
2.9e-48 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP011590 |
| N. vitripennis |
NV13727-PA |
| S. invicta |
SI2.2.0_15253 |
| C. quinquefasciatus |
CPIJ012157 |
| A. mellifera |
GB15453-PA |
| N. vitripennis |
NV14407-PA |
| A. aegypti |
AAEL006371 |