MidgeBase gene description page [Pn.05462]
Outline
| Gene ID | Pn.05462 |
| Type | Protein coding gene |
| Scaffold | PnScaf4807 |
| Start | 10407 |
| End | 12901 |
| Direction | + |
Sequence
Transcript: 1071 (bp)
ATGAAATCGAATTTGTCGCTCTTAATTGCGATACTTTATCTGCACAGCTGCATTGATTCAATTATCTGCGCTTCGATCGTGCGAGCAAGCGACATTTTTGCGACGCCACAAATTAATGATGAACCAATTATCGGCATTCTGGCGGAGGAGTTGCTCTACTCGCTCGAGGACAAATATCCCGGTCAATATCATAGCTACATCGCCGCGTCGTACGTGAAGTTCGTCGAGGGTGGCGGAGCGCGTGTTGTTCCAATTTGGATTGGTAAGCCACGCGAGTATTATGAAGACATCATGTCGAAGCTTAACGGAGTGCTTTTTCCGGGCGGCGCTTTGTGGTTCAACGAGACGAACGGCTACTCCGAAGCGGGCATGCACATTTACTCGATTGCCTCGCGGATGAACGACGAAGGCGACTACTTTCCCCTTTGGGGCACGTGCCTCGGCTTCGAGCTGCTCACATACTTGTCCGCCAATGGAACCGAGCACCGTGCGGACTGCTCCTCAAGCAGCCAGTCCCTTCCGCTCGAGTTCAAAGACGACTTCCGAGAGTCGCGAATGTTTAAAGAGGCGCCCGAAAAAATTGTCGAAATTCTCCGCAACGAAGATGTGACATCGAACTTTCATCAGTACTGCGTGACGGAGAGGAACTTGACAGAGTACGGCATCGATAGAGAGTGGCGTGTAATGTCGGTAAACAGCGATTGGAATGGCTTTGAATTTATTTCGACGATCGAGCATTACCGTTATCCGTTTTACGGCATTCAATTCCACCCGGAGAAGAACATTTACGAGTGGGTGCGCAACAAGAACATTTCGCACACGACAAACGCCGTCATCGCGTCGCAGTTCTTCGCCGAGTTCTTTGTCAGCGAGGCGCGCAAGAGCGACCATCGTTTCGCCAGCGCCAAGGTCCAGGACCAGTACGTGATTTACAATTTTCCGGCCGAGTTCACCGGCGCCAAAGGATCGTCCTTCGAGCAGTGCTACATGTTTGGCGATGACGTCGACTACCGCTTTGTGACCAGCGGCAGCGCTCGCAGCGCGAAGGAGAATGAGGACATCGTTGGATTT
Protein: 357 (aa)
MKSNLSLLIAILYLHSCIDSIICASIVRASDIFATPQINDEPIIGILAEELLYSLEDKYPGQYHSYIAASYVKFVEGGGARVVPIWIGKPREYYEDIMSKLNGVLFPGGALWFNETNGYSEAGMHIYSIASRMNDEGDYFPLWGTCLGFELLTYLSANGTEHRADCSSSSQSLPLEFKDDFRESRMFKEAPEKIVEILRNEDVTSNFHQYCVTERNLTEYGIDREWRVMSVNSDWNGFEFISTIEHYRYPFYGIQFHPEKNIYEWVRNKNISHTTNAVIASQFFAEFFVSEARKSDHRFASAKVQDQYVIYNFPAEFTGAKGSSFEQCYMFGDDVDYRFVTSGSARSAKENEDIVGF
| Type | Start | End | Length |
| CDS |
10407 |
10663 |
257 |
| CDS |
11534 |
11584 |
51 |
| CDS |
11708 |
12044 |
337 |
| CDS |
12298 |
12694 |
397 |
| CDS |
12870 |
12898 |
29 |
| intron |
10664 |
11533 |
870 |
| intron |
11585 |
11707 |
123 |
| intron |
12045 |
12297 |
253 |
| intron |
12695 |
12869 |
175 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654802 |
gamma-glutamyl hydrolase, putative [Aedes aegypti] gb|EAT48732.1| gamma-glutamyl hydrolase, putative [Aedes aegypti] |
1e-131 |
| InterPro |
IPR015527 |
Peptidase C26, gamma-glutamyl hydrolase |
|
| InterPro |
IPR011697 |
Peptidase C26 |
|
| Gene Ontology(BP) |
GO:0006541 |
glutamine metabolic process |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0008242 |
omega peptidase activity |
|
| Pfam |
PF00117.23 |
Glutamine amidotransferase class-I |
7.9e-10 |
| Pfam |
PF07722.8 |
Peptidase C26 |
2.6e-34 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000260118 |
| N. vitripennis |
NV17561-PA |
| H. melpomene |
HMEL005591-PA |
| A. gambiae |
AGAP006670 |
| H. melpomene |
HMEL009954-PA |
| M. musculus |
ENSMUSG00000073987 |
| T. castaneum |
TC003035 |
| A. aegypti |
AAEL000271 |
| D. melanogaster |
FBgn0263607 |
| P. vanderplanki |
Pv.04967 |
| P. humanus |
PHUM191920-PA |
| A. mellifera |
GB17367-PA |
| S. invicta |
SI2.2.0_12245 |
| D. plexippus |
DPOGS204888PA |
| B. mori |
BGIBMGA011712-TA |
| C. quinquefasciatus |
CPIJ006930 |