MidgeBase gene description page [Pn.05360]
Outline
| Gene ID | Pn.05360 |
| Type | Protein coding gene |
| Scaffold | PnScaf4655 |
| Start | 4158 |
| End | 9115 |
| Direction | - |
Sequence
Transcript: 963 (bp)
ATGCACAAAGACAATGCGGATATTTCGGTAATTGGAGCGCTCGGCGACTCGCTGACATGTTCGACGGGCGCAATGGCCGAGCGCATGATGGAGCTGTCGATGGAAAATCGCGGCGTCTCGTGGAGCATTGGAGGTCAATGGAACTGGCGGAATGCTACGACGCTGCCAAACATCCTCAAAGTGTTCAATCCATCGCTCATCGGCTACTCGCTCGACGATTCGTTTCCCTTCCACAAGGCATCGCAATTTAATCTCGCCGAAATTGGTGCCGTCTCAACAGACATGCCCTTTATGGCACGCGCTCTGGTGAAGCGCATTCGCAACGATAGACGTGTGAACTTCAAGAAAGATTGGAAGATCGTGACGATAACGATAGGCGGCAATGACATATGCAGCTTCATTTGCCTCATGGACAATCCCGAGAAACTGCCCGACATGCATCGCATCTCGCTGATGAAAACGCTGCGCTATCTCAAGAACAACCTGCCGCGGACTTTCGTGAACATTGTGTCCGTGCCGCACGTCGAGACGGTCATGATCTACTCTGGGAAGCCGAAGGCGTGCAGCTTCATCCATCGAGGTGAATGCGCTTGCTGGGTCGGTCCGTTATCTAACATCACGAGGGAGACACGTGACAGATGGAGGAAGATTCAGCAGCGCTTCATAAAAGTCGAGGAGGAGGTCGCCAAATCGGATGAGTTCCGTCGTCTTGATGAATTTGCCGTCATGTACCAGCCGTGGTCGACGAATGTGTCGTTTATCGTCGACGGCAAACGCGACCTGACGCTGCTCTCGTTCGACTGCTTTCATCTGTCGCAGAAGGGCAACGCTTGGGGCGGCACGGCGCTGTGGAACAACATGGTCGAGCCGGTTAACAAGAAGACCCACAACTGGCATAATCCGCTGAAGAAGTTCAACTGCCCGACTCGCGAGCATCCCTACATTTACACTTACGACAACAGC
Protein: 321 (aa)
MHKDNADISVIGALGDSLTCSTGAMAERMMELSMENRGVSWSIGGQWNWRNATTLPNILKVFNPSLIGYSLDDSFPFHKASQFNLAEIGAVSTDMPFMARALVKRIRNDRRVNFKKDWKIVTITIGGNDICSFICLMDNPEKLPDMHRISLMKTLRYLKNNLPRTFVNIVSVPHVETVMIYSGKPKACSFIHRGECACWVGPLSNITRETRDRWRKIQQRFIKVEEEVAKSDEFRRLDEFAVMYQPWSTNVSFIVDGKRDLTLLSFDCFHLSQKGNAWGGTALWNNMVEPVNKKTHNWHNPLKKFNCPTREHPYIYTYDNS
| Type | Start | End | Length |
| CDS |
4161 |
4367 |
207 |
| CDS |
4436 |
4553 |
118 |
| CDS |
4678 |
4735 |
58 |
| CDS |
5128 |
5413 |
286 |
| CDS |
5507 |
5605 |
99 |
| CDS |
5676 |
5737 |
62 |
| CDS |
5803 |
5916 |
114 |
| CDS |
9097 |
9115 |
19 |
| intron |
4368 |
4435 |
68 |
| intron |
4554 |
4677 |
124 |
| intron |
4736 |
5127 |
392 |
| intron |
5414 |
5506 |
93 |
| intron |
5606 |
5675 |
70 |
| intron |
5738 |
5802 |
65 |
| intron |
5917 |
9096 |
3180 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651741 |
phospholipase b, plb1 [Aedes aegypti] gb|EAT42506.1| phospholipase b, plb1 [Aedes aegypti] |
1e-125 |
| InterPro |
IPR013831 |
Esterase, SGNH hydrolase-type, subgroup |
|
| InterPro |
IPR001087 |
Lipase, GDSL |
|
| InterPro |
IPR013830 |
Esterase, SGNH hydrolase-type |
|
| Gene Ontology(BP) |
GO:0006629 |
lipid metabolic process |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Gene Ontology(MF) |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
| Pfam |
PF00657.17 |
GDSL-like Lipase/Acylhydrolase |
2.3e-16 |
| Pfam |
PF13472.1 |
GDSL-like Lipase/Acylhydrolase family |
5.3e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ012577 |
| A. aegypti |
AAEL005969 |
| A. aegypti |
AAEL005957 |
| A. gambiae |
AGAP011512 |
| C. quinquefasciatus |
CPIJ012576 |
| A. gambiae |
AGAP011511 |
| P. vanderplanki |
Pv.13257 |