MidgeBase gene description page [Pn.05321]
Outline
| Gene ID | Pn.05321 |
| Type | Protein coding gene |
| Scaffold | PnScaf4606 |
| Start | 28192 |
| End | 28927 |
| Direction | + |
Sequence
Transcript: 606 (bp)
ATGAAAGCAAGTGTGATCGCCCTGTTCTTCGCATTCGTGGTGATTTCTGCTGATTTATCACCATCAGCAGCACAAGAGAATGTTTCCTTGAAATGCTACGACGACATCGGCTGCCTCAACATCACGGACGCATGGTACGATTCGAAGGAGCGTCCGCTCAACGTCTTCCCGAAGTCGCGGCTATTCGTTAACACACAATTCTACCTGTTTACGGCTGACAACACGGACGAAGCGCCACAAATGCTGAACGCCGACGACTCTGCCTCAATTACAAATTCCGACTTCCGCTCCGACCGCCACACATTCTTCATCATCCATGGCTACCTCAACACACAAAAAACGCCGTGGATCGCAAAAATGCGCACGGAACTGCTACGGAATTCGCCCAACAACCAAGTGATTGTCGTCGACTGGAACTCGTTGCCACCGTACACGCGGGCCGCCGCCAACATCCGCCTCGCTGGCCTCGAACTCGCCCATCTCATTAAACAGCTCCACGACAACCACGCGCTCGCTTTGGACAACGTTCATCTCATTGGCCACTCGCTCGGCTCACATTTGGCCGCATACGCGGTCGATGCCCGTTATGGTGCGTCTCGACGCGAG
Protein: 202 (aa)
MKASVIALFFAFVVISADLSPSAAQENVSLKCYDDIGCLNITDAWYDSKERPLNVFPKSRLFVNTQFYLFTADNTDEAPQMLNADDSASITNSDFRSDRHTFFIIHGYLNTQKTPWIAKMRTELLRNSPNNQVIVVDWNSLPPYTRAAANIRLAGLELAHLIKQLHDNHALALDNVHLIGHSLGSHLAAYAVDARYGASRRE
| Type | Start | End | Length |
| CDS |
28192 |
28202 |
11 |
| CDS |
28268 |
28830 |
563 |
| CDS |
28893 |
28924 |
32 |
| intron |
28203 |
28267 |
65 |
| intron |
28831 |
28892 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003401623 |
PREDICTED: pancreatic triacylglycerol lipase-like [Bombus terrestris] |
1e-41 |
| InterPro |
IPR002331 |
Pancreatic lipase |
|
| InterPro |
IPR000734 |
Lipase |
|
| InterPro |
IPR013818 |
Lipase, N-terminal |
|
| Gene Ontology(BP) |
GO:0006629 |
lipid metabolic process |
|
| Gene Ontology(MF) |
GO:0004806 |
triglyceride lipase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF05990.7 |
Alpha/beta hydrolase of unknown function (DUF900) |
6.9e-05 |
| Pfam |
PF06259.7 |
Alpha/beta hydrolase |
0.022 |
| Pfam |
PF00561.15 |
alpha/beta hydrolase fold |
0.051 |
| Pfam |
PF05057.9 |
Putative serine esterase (DUF676) |
0.0099 |
| Pfam |
PF02450.10 |
Lecithin:cholesterol acyltransferase |
0.11 |
| Pfam |
PF12695.2 |
Alpha/beta hydrolase family |
0.0066 |
| Pfam |
PF12697.2 |
Alpha/beta hydrolase family |
8.6e-05 |
| Pfam |
PF05089.7 |
Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain |
0.047 |
| Pfam |
PF00151.14 |
Lipase |
7.6e-29 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes