MidgeBase gene description page [Pn.05218]
Outline
| Gene ID | Pn.05218 |
| Type | Protein coding gene |
| Scaffold | PnScaf4507 |
| Start | 6048 |
| End | 11427 |
| Direction | - |
Sequence
Transcript: 1038 (bp)
ATGCTGGGACAACAGCATCACAGGCACCCCTTCAGGATGGACATTTCATCACCGACGCCATCCGATCAGCAGTACGCCCTCAAATGGAACGACTTTCAGTCATCGATACTGTCGTCGTTTCGTCATTTACGCGACGAGGAGGACTTTGTTGATGTTACATTGGCGTGCGATCAGCGATCATTTACTGCCCATAAGGTGGTATTGAGCGCATGCAGTCCGTATTTTCGTAAATTACTAAAGGCCAATCCTTGCGAACATCCAATCGTTATTCTTCGAGACATTCGCTCCGAAGACGTGGAAAATTTGTTAAGATTTATGTACAATGGAGAAGTTCACATCGGACAGGAACAGCTGAGTGACTTCCTCAAGACGGCGCACTTGCTTCAGATCCGCGGACTTGCCGAAGTTACCAACAACCACCACTCACTGCATAAAAGCAATCTATCACACAACGCTTCCCTCAACCCGGCCTCGATACTTCCCGCTTTGACGGCGTCGCTGAGCAAAGAGATGAGAAACTCTCCACAAAATCAAAGCTCAACATCAATTCCATGGGATATGATTACAGATGACTCCTCGCAGCCGACACCGCCACCGCAAAAACGAATCAAATCGGTCGAGCTTTACAAGAAACAGCACGGACTCACGGACGAGCAGCTGATGGTGCGCGACCACTTGCAGTCGCGCGTTCAACAGCACGCCCTGCACCGCGAGCGCGACAAGTCGAAGGACCGAGCCGACCGCGACCGCAGTCTCGAAATGAAGGACTCGCTGCTGAGTCAGGCGCTCGAGGGCGGCCCCACACTCACGATTCCACCGCAGCATCCCGACTTGCAGTCCCTTCAGGCGCAGAGCACCGGTGAGGACTCGAACAGCAGCGACACCGTGGCATCTGACGCCGGCGACATGCACGACGGCCTCAACGGCTCGCTCGACCACTCACGAACGCCGACCTTCGCCAACTCGTTCCTCGGCCTGCCCGGCCTGTTGCCCGGACCATCTGGCATGAGCGACAACTTCGCCCTCATCACCATCGCA
Protein: 346 (aa)
MLGQQHHRHPFRMDISSPTPSDQQYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDQRSFTAHKVVLSACSPYFRKLLKANPCEHPIVILRDIRSEDVENLLRFMYNGEVHIGQEQLSDFLKTAHLLQIRGLAEVTNNHHSLHKSNLSHNASLNPASILPALTASLSKEMRNSPQNQSSTSIPWDMITDDSSQPTPPPQKRIKSVELYKKQHGLTDEQLMVRDHLQSRVQQHALHRERDKSKDRADRDRSLEMKDSLLSQALEGGPTLTIPPQHPDLQSLQAQSTGEDSNSSDTVASDAGDMHDGLNGSLDHSRTPTFANSFLGLPGLLPGPSGMSDNFALITIA
| Type | Start | End | Length |
| CDS |
6051 |
6067 |
17 |
| CDS |
9100 |
9298 |
199 |
| CDS |
9363 |
9659 |
297 |
| CDS |
9895 |
10108 |
214 |
| CDS |
10562 |
10677 |
116 |
| CDS |
10987 |
11172 |
186 |
| CDS |
11419 |
11427 |
9 |
| intron |
6068 |
9099 |
3032 |
| intron |
9299 |
9362 |
64 |
| intron |
9660 |
9894 |
235 |
| intron |
10109 |
10561 |
453 |
| intron |
10678 |
10986 |
309 |
| intron |
11173 |
11418 |
246 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR23109 |
hypothetical protein AND_13530 [Anopheles darlingi] |
1e-100 |
| InterPro |
IPR013069 |
BTB/POZ |
|
| InterPro |
IPR011333 |
BTB/POZ fold |
|
| InterPro |
IPR000210 |
BTB/POZ-like |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00651.26 |
BTB/POZ domain |
3.6e-28 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_14371 |
| A. gambiae |
AGAP008031 |
| A. mellifera |
GB19033-PA |
| H. sapiens |
ENSP00000463555 |
| T. castaneum |
TC013098 |
| N. vitripennis |
NV10622-PA |
| A. aegypti |
AAEL002008 |
| C. quinquefasciatus |
CPIJ008081 |