MidgeBase gene description page [Pn.05209]
Outline
Gene ID | Pn.05209 |
Type | Protein coding gene |
Scaffold | PnScaf4480 |
Start | 18271 |
End | 18872 |
Direction | - |
Sequence
Transcript: 423 (bp)
ATGAGTGTGAAACTAAAATCTGTGTTCAAAATATTCTGTGTCTCAGTGGCCTTTGTTTTGCTCTGCTACATCGAGGGAAAATTTGAGATTTTTTCGTCGAAATCTGCGAAGCCGCAAATGTCGAGTCAAAAAATTTTCTTCACCGACTTTGAGGTGTTTGGAACCGTGCAAGGTGTTTTCTTCCGAAAGCACACTGAGGAGGCCGCCAATAAATTCAAAATTCGCGGCTGGTGCATGAACACCAAAGAAGGAACTGTTAAAGGACAAATTGAGGGAGAAGAGCCTGCGTTCTCCATGATGAGGACCTGGCTATCGTTGGAGGGAAGTCCTCAGTCGCGCATCGAGAGGGCCGAATTCGCGAACTTTAAGGAAATTCCCAACTACACCTTCGACAAATTCGAAATCCGAAGAGTTCCCAAGAAA
Protein: 141 (aa)
MSVKLKSVFKIFCVSVAFVLLCYIEGKFEIFSSKSAKPQMSSQKIFFTDFEVFGTVQGVFFRKHTEEAANKFKIRGWCMNTKEGTVKGQIEGEEPAFSMMRTWLSLEGSPQSRIERAEFANFKEIPNYTFDKFEIRRVPKK
Type | Start | End | Length |
CDS |
18274 |
18397 |
124 |
CDS |
18456 |
18565 |
110 |
CDS |
18622 |
18638 |
17 |
CDS |
18701 |
18872 |
172 |
intron |
18398 |
18455 |
58 |
intron |
18566 |
18621 |
56 |
intron |
18639 |
18700 |
62 |
Auto annotation result
Program/Analysis | Accession | Description | Score/Expectation |
BLASTP/NCBI-nr |
XP_002017293 |
GL22235 [Drosophila persimilis] ref|XP_002137790.1| GA27428 [Drosophila pseudoobscura pseudoobscura] gb|EDW34393.1| GL22235 [Drosophila persimilis] gb|EDY68348.1| GA27428 [Drosophila pseudoobscura pseudoobscura] |
1e-27 |
InterPro |
IPR001792 |
Acylphosphatase-like |
|
InterPro |
IPR017968 |
Acylphosphatase, conserved site |
|
InterPro |
IPR020456 |
Acylphosphatase |
|
Gene Ontology(MF) |
GO:0003998 |
acylphosphatase activity |
|
Pfam |
PF00708.13 |
Acylphosphatase |
4.7e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
Species |
Gene ID |
B. mori |
BGIBMGA005429-TA |
A. mellifera |
GB19157-PA |
C. quinquefasciatus |
CPIJ011780 |
H. sapiens |
ENSP00000238618 |
D. melanogaster |
FBgn0033893 |
A. aegypti |
AAEL008369 |
M. musculus |
ENSMUSG00000008822 |
D. melanogaster |
FBgn0085190 |
H. sapiens |
ENSP00000451581 |
H. sapiens |
ENSP00000450873 |
P. vanderplanki |
Pv.06513 |
P. humanus |
PHUM473470-PA |
D. plexippus |
DPOGS213829PA |
P. vanderplanki |
Pv.10657 |
D. melanogaster |
FBgn0038363 |
P. humanus |
PHUM256360-PA |
H. melpomene |
HMEL012684-PA |
N. vitripennis |
NV12864-PA |
S. invicta |
SI2.2.0_15978 |
D. plexippus |
DPOGS202741PA |