MidgeBase gene description page [Pn.05169]
Outline
| Gene ID | Pn.05169 |
| Type | Protein coding gene |
| Scaffold | PnScaf4435 |
| Start | 68230 |
| End | 69704 |
| Direction | + |
Sequence
Transcript: 1011 (bp)
ATGACGCGATTGTCTCGTCAAAACATAAGGACTCTGTCGCTGGTGATTGTGACTTTCACCTACTTGCTGGTCGGTGCAGCAGTCTTTGATAGATTAGAATCTGAAAATGAAGCAGTCCGATGGGAATTTCTGCAGTCGGCGAAAGTGAATATCCTCAAAAAGTATCAAATGTCGGAGGAGGATTACAAAATGCTCGAAGTCGTAGTCATAGAGAACAAGCCTCACAAAGCCGGTCCACAGTGGAAATTTCTAGGCGCTTTCTATTTTGCGACTGTCGTTCTTGCCATGATCGGCTATGGACATTCGACCCCGAACACCAATGCGGGAAAGGCTTTCTGCATGATTTACGCAATGGTCGGAATTCCATTAGGTCTCGTAATGTTTCAGTCCATCGGTGAACGTCTGAATAAATTTGCATCAGTAGTTATTAGGAGATTTAAAATATTCATCAAATGCAAGCAAATCGAGGCAACTGAAATCAATTTAATGGCCGCAACAGGTTTTCTCTCCTCGATAATTATTCTGACGGGTGCAGCCGTGTTCTCGAAGTACGAAAATTGGAGCTATTTTGATTCCTTCTATTATTGCTTCGTGACTTTGACCACAATAGGATTTGGCGACTATGTCGCTCTGCAGAATGATCGAGCTCTTCAAAACAATCCGGGATATGTCGCCTTATCGCTGGTGTTCATCCTTTTTGGCCTCGCAGTTGTTGCTGCCTCCATCAACTTGCTTGTCCTTCGTTTCATGACAATGAATGCTGAGGACATACGGATAGAGAACGAAGAGCTGCAGAGGCAGGCGATGAAGAACCAAGTGCAAATTATGACGTGCGAAGGCGAGCGCGATAACATTTCGAATAAGCTGATAAATTCGTCTGTGAATGAGGACCAGCAGTCGGTGTGTAGTTGCAATTGCATGGGCACAAGCAGCGAAAATGGCCAATTAATCGACGGTTATCTGCCGACGGATCTCGTGACGAGCTCGCTCAGTCTCAAAAGAGCTTCCGTT
Protein: 337 (aa)
MTRLSRQNIRTLSLVIVTFTYLLVGAAVFDRLESENEAVRWEFLQSAKVNILKKYQMSEEDYKMLEVVVIENKPHKAGPQWKFLGAFYFATVVLAMIGYGHSTPNTNAGKAFCMIYAMVGIPLGLVMFQSIGERLNKFASVVIRRFKIFIKCKQIEATEINLMAATGFLSSIIILTGAAVFSKYENWSYFDSFYYCFVTLTTIGFGDYVALQNDRALQNNPGYVALSLVFILFGLAVVAASINLLVLRFMTMNAEDIRIENEELQRQAMKNQVQIMTCEGERDNISNKLINSSVNEDQQSVCSCNCMGTSSENGQLIDGYLPTDLVTSSLSLKRASV
| Type | Start | End | Length |
| CDS |
68230 |
68321 |
92 |
| CDS |
68377 |
68512 |
136 |
| CDS |
68593 |
68853 |
261 |
| CDS |
68916 |
69018 |
103 |
| CDS |
69102 |
69119 |
18 |
| CDS |
69196 |
69340 |
145 |
| CDS |
69446 |
69701 |
256 |
| intron |
68322 |
68376 |
55 |
| intron |
68513 |
68592 |
80 |
| intron |
68854 |
68915 |
62 |
| intron |
69019 |
69101 |
83 |
| intron |
69120 |
69195 |
76 |
| intron |
69341 |
69445 |
105 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001845701 |
acid-sensitive two pore domain K+ channel dTASK-7 [Culex quinquefasciatus] gb|EDS41390.1| acid-sensitive two pore domain K+ channel dTASK-7 [Culex quinquefasciatus] |
1e-137 |
| InterPro |
IPR022306 |
Two pore domain potassium channel, TASK/TWIK |
|
| InterPro |
IPR003280 |
Two pore domain potassium channel |
|
| InterPro |
IPR003092 |
Two pore domain potassium channel, TASK family |
|
| InterPro |
IPR013099 |
Ion transport 2 |
|
| Gene Ontology(BP) |
GO:0071805 |
potassium ion transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005267 |
potassium channel activity |
|
| Pfam |
PF05767.7 |
Poxvirus virion envelope protein A14 |
0.4 |
| Pfam |
PF07885.11 |
Ion channel |
9.4e-35 |
| Pfam |
PF00520.26 |
Ion transport protein |
4.7e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS204164PA |
| N. vitripennis |
NV11561-PA |
| P. humanus |
PHUM238580-PA |
| C. quinquefasciatus |
CPIJ004071 |
| P. vanderplanki |
Pv.05618 |
| A. aegypti |
AAEL007386 |
| H. sapiens |
ENSP00000302166 |
| H. sapiens |
ENSP00000429847 |
| B. mori |
BGIBMGA005082-TA |
| M. musculus |
ENSMUSG00000036760 |
| T. castaneum |
TC013295 |
| D. melanogaster |
FBgn0037690 |
| A. gambiae |
AGAP002466 |
| H. sapiens |
ENSP00000430676 |
| A. mellifera |
GB18297-PA |
| S. invicta |
SI2.2.0_13400 |