MidgeBase gene description page [Pn.05096]
Outline
| Gene ID | Pn.05096 |
| Type | Protein coding gene |
| Scaffold | PnScaf4374 |
| Start | 27596 |
| End | 34144 |
| Direction | + |
Sequence
Transcript: 4617 (bp)
ATGCAGTTGAACTTAGTTTTGTTCACAAGTTTTGTGAGTGTAATTTACTGCCAAAATCCAGATAGCAATAGAATTGTGAATCGGAGAGAGCAGAGTGAAGATATTCTTGAGGCCTTTCGCAGAGCATTTTGGCTTCACGAGATGTCAAACGTGAGAGTTTTTGCAAAAAAGGAAATTTTCGATCTGCTCAACTTGCAGTCGTTAAGGATTCCTCATGAAATTTTCACCATTGAATTTTTCTCGAAGCTGAACTCAAGCTATGAATTCGATTTGTCGCAAGTCAATGCAGTCCTTTACGAGAGCAACGAGGAAATTTTCTCGACATTGTCCTCGAAAAATTTGAGATTTTTCCGCCTCGATGGCTTCTTCTTGCTCTTGTCATTCGGCGAGTGTTCGAAGGCCGACGAAGAGGTTTTTCAACATCTCTGGAAGCGACAAATCTTCAATGTCAATTTAGTTTGTAGACTGAAGACTGAAATTCTGATGACAACGTTCTTTCCTTATCAAGCAAACAGCTGCGGCAGCACGAATGCGATGATAATAAATAAGTACGAGAACAACTCGTGGATCCACACGTCGCTCTTTCCATCAAAGTTCAGAAGCCTTTTTCGCTGCACTCTAAGAATCGCCTCGTTCTTCTATCCGCCAATAACGATGCGAGAAACCCTCGAAGACGGCAGCTTTCGCTACTATGGCAGTGAGATGGAAATTGTCATCGGCCTGTCTCAAGCACTAAACTTCAACATCAATCACACTTACATAAATCAGTCCGGCTCGTCGGGAATCCTCCTTGAGAACGGCACTGCAGCCGGCCTGATTAAGCTGGCAGTGGACGGCGATGTTGATATGCTTATGGGCTTTTACTACCTCACTTATGTGCGGACAAAGTTCTTGAGTTTCTCGCAGTCGCACTACAGCATTCCGCTGGTCATCATGATTCCGCTCGGCATGCCCTTCTCGCCCTTCGAAAAGCTCTTCAATCCACTTCAGTTCACGGTCTGGATTTTTCTTCTCGTCACAATCTTCGTAGGAATCGTTTGCATCGCCATCGTCAACTGTCAGAGCGAGCGAGTAAAGAATTTCATTTTCGGCCGAGGCGTGAGGTCTCCATTCATGAATTTCCTCAACGTTCTCCTCAATGGCATTCAAAATAGACTGCCCGAGAAGAATTTTGCACGCTTCGTCCTAATGATGTTCATGATTCTGTGCTTCATCTTGAGAACCCTCTACCAGGGCTCGCTCTTCAATTTTCTTCAATCCGAGAGCAGACATTCGGAAATGTCGACAATTAGCGAAATGATGGCTCTGAAGTTTGACTTTTACATTCGAGACACGCTCGAGCATAACATCAAGCACATGAGCTTTTATGAACGACGGAAGGTCGTGAAGAACGCCGAGTATCCACAGTTGATTACGCACACACTCGATCCAACCTTCAAAGGCGGAATAATCATGCCGCTCCTCGAAGTCATCAACGCCAACCAGCTGACTTACAAGAACTTTACCTACAAAGTCCTCAAGGAATACCTCCTCGATGTCCAAATCGTCTACTACTATCCGAAGAATTTTCACTTGGTGAACTCAATCAACGAGAAGCTGGGAGTGTTGAAGGCCGCCGGTCTGGTCTCGCTGTGGATGGACAGTTACGTTGACAAGCGCTACATAAAAATCAATTACGTCGACACAGAGCCGAAACGAATCAGCATCGAGCACTTGATTGGCGGTTTCAAAATCTTGGTGATCGGTCTTTCACTGGCAACCGCGACATTTATTTGCGAGGTCATCGGCGTGCCGAAAGTGCTGATGAAATGTCGAAAATTCGCTAGCGAAAGAGTCAAGAAGCGGAAGAAAAAGTCGCCGAACGAGTGTCAAAGAATGAGGTTGAGTTTTCTCGTAGTCGCGAGTCTTTTCGCGTCGACTGAGAGCAAAAGTCAAGAGGTGCTCGAGGCGTTCGAGGGTGCAATTGTTGCGTGCGGTGGGCAGAGTGTGAGGATCATTGGGCCGAAAAAGGCGCTCGATTTGATTGAGTGGCAGCTTTTGACAATTTCTCGTGAAATTTGGTTGATTCGGGCGTTTAATGAGGAGAGTGTGGGAGAACGCAGTCTCTCTTTTGTCACCGCAGTTATCTTTGCAGCAAACGAGGAAATTTACTCGACATTTGCCGCTAAAAATTTGCGATTTTTTCGCCTTGACGGCTTCTTTCTGCTTCTGTCACTTAGAGAGTGCTCCAAAGACGACGACGAAGTCTTCAAACTTCTGTGGAAGCGGCAAATATTCAACGTCAATTTGATTTGCAGTCACAATACTGAAATATTAATGACAACCTTCTTTCCCTATAAAAACGACAGTTGTGGCAACACACGTGCAACAGTCATCAACACATATGTCGACAGCAAGTGGCGCGACACACCGGCATTCCCGCAAAAATTCAAAAACCTCTTCGGCTGCCAATTGAGAGCAGCCTCGTTCGCCTACCCGCCAATTACGATGCGCGAGGAGCTCTGCGACGGAAGCTTTCGGTACTTTGGCAGCGAAATGGAGATTTTGGAAGGAATTTCAGGCGCGCTCAATTTCACAGTTGCTCACACATTTTTGACGACTTCCGGAGCTTCAGGAATTCTCCTCGACAACGGCACAGCGACCGGCATTCTGAAGCAGACGATTGACGGCGAAATCGATTTTCTCATGGCCTTCTATTACCTCACCTACCAGCGCACCAGATTTCTGAGCTTCTCGCAGTCGCACTACAGCATTCCGCTGGTCATCATGATTCCGCTCGGCAAACCCTTCTCGCCCTTCCAGAAGCTCTTCAATCCTCTCCAACTGGTCGTCTGGATCTTCATTCTCACGACCATCTTCGTCGGCATGGTCTGCATCGCCGTCGTCAACTGCCAGAGCGAGCGCGTGCGGAATTTCATCTTCGGCAGAGGAATCAACGCGCCTTTCATGAATTTCCTCAACGTGCTGCTCAACGGCGTGCAGACGAAGCTGCCCGAGCACAATTTCGCTCGCTACCTGCTCATGATGTTCATGATTTTTTGCTTTGTCGTGAGGACGCTCTACCAAGGTTCGCTCTTTCAGTTTTTGCAGTCGGACGATCGAAGCCCCGAGCTCTCGACCATCGATGAAATGATGGCGCACAACTTTGTCTTTTACATTCGCGAAACGCTCGAGCACAACATCAAGAACATGAGTTTCTATTCACGCCGAAAGGTGGTGAAGTTCGGCGACTATCCAGAACTAAGAGCCAAAACTCTCGACCCAACTTTCAACGGTGGTGTCATCATGCCGCTGCTTGAGGTCATCATCGCGAACCAGCAAAACTACAAGAACTTCACGTACAAAGTCCTCAAGGAATATCTCTTTGACGTGCAAATTGTCTTTTATTTTCCGAAAAACTTTCACCTTGTCAATTCCATCAACGAGAAGATCTCGCTGATGAAGGCAGCCGGCCTGATCTCGATGTGGATGGACAAGTACGTGGACAAGAGCTACATAAAGATCAAGACTGCGAGCATTGGGCCGCGAAAGTTCAACATCGAGCAGTTGTTTGGTGGATTTGAGATTTTGATTGTTGGGATGAGCTTGGCAGTGGTTGTCTTCATGCTGGAGCTGGCTTGTGCTTCGAGGGCTGTGAAAGTTGCGAGAAAAAGACTGCTGAGGTGCACGAGGAACAGAACACCAACTGTTACACTCAACAATGGCAAGCAGTTTCCCATCGTTGGCCTTGGAACGTGGAATTCACCACCCGGCGAGGTAGCTCGCGCAGTCAAAGACGCCATCGATGCCGGTTATCGTCACATCGACGGCGCCCACGTCTATGAGAATGAGCACGAGGTCGGCGAAGGAGTTAACGCGAAAATCGCCGAAGGAGTCATCAAGCGCGAGGATGTGTTTGTCACCTCGAAACTGTGGTGCACATTCCACGACCCGAAAGAGGTTCGCGGAGCTCTCGAGCACACGCTGAAGCAGCTCAATCTCGCCTACCTCGACCTCTACTTGATGCACTGGCCCATCGGCTACGTAAAGTCGACTGAGCTCTTCCCCAAGAACGAGGCCGGTGAGATCCAGCACAGTCACTTTGACTTGCTCGACACTTGGCGCGCAATGGAGGAGCTGGTCGACGCTGGACTCACCAAGAGCATTGGCGTGTCGAACTTCAACGTGAAGCAGATCGATTACATCACGAAGAACGCGAGAATCCAGCCGGTCACCAATCAGATCGAGTGCCATCCGTACCTGCTGAACAAGGAGATCAGCGACTTCTGCAAGACCAAGAATGTCGTCATCACCGCTTACTCTCCTCTCGGCTCGCCAGGCCGTCCATGGGCGACTCCCGATGACCGAGTTTTGCTGAAGGAACCGAAGCTCTTGGAGATCGCTCAGCGTCACAACAAATCACCGGCGCAAATCTTAGTTCGCTACCAAATTCAGCGCGGTCACGTTGTCATTCCGAAGTCTGTGACAAAGGACCGCATCGTCAATAACTTCGATGTCTTTGGCTTCAAATTGACCGATGATGAGGTGAAGGACTTGGAGAGCTTCGGCTACACTGAGCGCATTTGCAGTATGTCGCAGGACAAGCACCATCCGGACTATCCCTTCAAAGACGTGGCT
Protein: 1539 (aa)
MQLNLVLFTSFVSVIYCQNPDSNRIVNRREQSEDILEAFRRAFWLHEMSNVRVFAKKEIFDLLNLQSLRIPHEIFTIEFFSKLNSSYEFDLSQVNAVLYESNEEIFSTLSSKNLRFFRLDGFFLLLSFGECSKADEEVFQHLWKRQIFNVNLVCRLKTEILMTTFFPYQANSCGSTNAMIINKYENNSWIHTSLFPSKFRSLFRCTLRIASFFYPPITMRETLEDGSFRYYGSEMEIVIGLSQALNFNINHTYINQSGSSGILLENGTAAGLIKLAVDGDVDMLMGFYYLTYVRTKFLSFSQSHYSIPLVIMIPLGMPFSPFEKLFNPLQFTVWIFLLVTIFVGIVCIAIVNCQSERVKNFIFGRGVRSPFMNFLNVLLNGIQNRLPEKNFARFVLMMFMILCFILRTLYQGSLFNFLQSESRHSEMSTISEMMALKFDFYIRDTLEHNIKHMSFYERRKVVKNAEYPQLITHTLDPTFKGGIIMPLLEVINANQLTYKNFTYKVLKEYLLDVQIVYYYPKNFHLVNSINEKLGVLKAAGLVSLWMDSYVDKRYIKINYVDTEPKRISIEHLIGGFKILVIGLSLATATFICEVIGVPKVLMKCRKFASERVKKRKKKSPNECQRMRLSFLVVASLFASTESKSQEVLEAFEGAIVACGGQSVRIIGPKKALDLIEWQLLTISREIWLIRAFNEESVGERSLSFVTAVIFAANEEIYSTFAAKNLRFFRLDGFFLLLSLRECSKDDDEVFKLLWKRQIFNVNLICSHNTEILMTTFFPYKNDSCGNTRATVINTYVDSKWRDTPAFPQKFKNLFGCQLRAASFAYPPITMREELCDGSFRYFGSEMEILEGISGALNFTVAHTFLTTSGASGILLDNGTATGILKQTIDGEIDFLMAFYYLTYQRTRFLSFSQSHYSIPLVIMIPLGKPFSPFQKLFNPLQLVVWIFILTTIFVGMVCIAVVNCQSERVRNFIFGRGINAPFMNFLNVLLNGVQTKLPEHNFARYLLMMFMIFCFVVRTLYQGSLFQFLQSDDRSPELSTIDEMMAHNFVFYIRETLEHNIKNMSFYSRRKVVKFGDYPELRAKTLDPTFNGGVIMPLLEVIIANQQNYKNFTYKVLKEYLFDVQIVFYFPKNFHLVNSINEKISLMKAAGLISMWMDKYVDKSYIKIKTASIGPRKFNIEQLFGGFEILIVGMSLAVVVFMLELACASRAVKVARKRLLRCTRNRTPTVTLNNGKQFPIVGLGTWNSPPGEVARAVKDAIDAGYRHIDGAHVYENEHEVGEGVNAKIAEGVIKREDVFVTSKLWCTFHDPKEVRGALEHTLKQLNLAYLDLYLMHWPIGYVKSTELFPKNEAGEIQHSHFDLLDTWRAMEELVDAGLTKSIGVSNFNVKQIDYITKNARIQPVTNQIECHPYLLNKEISDFCKTKNVVITAYSPLGSPGRPWATPDDRVLLKEPKLLEIAQRHNKSPAQILVRYQIQRGHVVIPKSVTKDRIVNNFDVFGFKLTDDEVKDLESFGYTERICSMSQDKHHPDYPFKDVA
| Type | Start | End | Length |
| CDS |
27596 |
28968 |
1373 |
| CDS |
29392 |
29872 |
481 |
| CDS |
30153 |
31504 |
1352 |
| CDS |
31638 |
32110 |
473 |
| CDS |
32696 |
32746 |
51 |
| CDS |
32818 |
32828 |
11 |
| CDS |
33203 |
33779 |
577 |
| CDS |
33843 |
34141 |
299 |
| intron |
28969 |
29391 |
423 |
| intron |
29873 |
30152 |
280 |
| intron |
31505 |
31637 |
133 |
| intron |
32111 |
32695 |
585 |
| intron |
32747 |
32817 |
71 |
| intron |
32829 |
33202 |
374 |
| intron |
33780 |
33842 |
63 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648461 |
aldo-keto reductase [Aedes aegypti] ref|XP_001648464.1| aldo-keto reductase [Aedes aegypti] ref|XP_001648465.1| aldo-keto reductase [Aedes aegypti] gb|EAT44550.1| aldo-keto reductase [Aedes aegypti] gb|EAT44553.1| aldo-keto reductase [Aedes aegypti] gb|EAT44554.1| aldo-keto reductase [Aedes aegypti] |
1e-117 |
| InterPro |
IPR001395 |
Aldo/keto reductase |
|
| InterPro |
IPR020471 |
Aldo/keto reductase subgroup |
|
| InterPro |
IPR018170 |
Aldo/keto reductase, conserved site |
|
| InterPro |
IPR001320 |
Ionotropic glutamate receptor |
|
| InterPro |
IPR023210 |
NADP-dependent oxidoreductase domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005234 |
extracellular-glutamate-gated ion channel activity |
|
| Gene Ontology(MF) |
GO:0004970 |
ionotropic glutamate receptor activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00060.21 |
Ligand-gated ion channel |
2.8e-16 |
| Pfam |
PF00248.16 |
Aldo/keto reductase family |
8.7e-55 |
| Pfam |
PF00497.15 |
Bacterial extracellular solute-binding proteins, family 3 |
8e-11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.08146 |
| P. vanderplanki |
Pv.08147 |