MidgeBase gene description page [Pn.05045]
Outline
| Gene ID | Pn.05045 |
| Type | Protein coding gene |
| Scaffold | PnScaf4331 |
| Start | 22997 |
| End | 24043 |
| Direction | + |
Sequence
Transcript: 675 (bp)
ATGTCTCTCATCGAAACTGACAATGTCTACCTTTTCATTCCAAATATCATTGGATACGCGAGAGTCGCATTAGCTGTAATATCGTTCTATTTCATGCCAACAAATTATGTCGTTTCGAGCTGGTGCTACATTATAAGTGTGCTTCTAGATGCACTCGACGGCCATGCAGCCAGAAAATTCAACCAGTCAACGAAATTCGGAGCCATGCTCGACCAGTTGACCGACCGCTGCGGCACCATGGGACTTCTCGTCACGCTAAGCTACTTCTATCCGAAGTATATGTTCTGGTTTCAATTATCGATGGCGATAGACGTTGCTTGCCACTGGTTTTATCTACACACCACCATTCTGCAAGGAAAGACGTCTCACAAGTTCATTGACATGAACGAAAATCCAATTATGCACATCTACTACACGAACCGAACAGTTCTGGGCTTCATGTGTCTTGGCAACGAACTGTTTTATGCGGCATTATACTTGCTCTACTTCACTCCCGGTCCTTTGTTCTTGGGTGTATCGACCTTCAAGCTGCTTGCCGTCGTCACCGCACCAATAGCCATAGTCAAGACACTGATCTCGGTCATACACGGAGTGGTGGCATCCGTCAACATCACAACGATTGATGCCAAAGAGCGCGAGGACGCCAAGAAGAGAGATCAAGGCAAAAAGAGCGAG
Protein: 225 (aa)
MSLIETDNVYLFIPNIIGYARVALAVISFYFMPTNYVVSSWCYIISVLLDALDGHAARKFNQSTKFGAMLDQLTDRCGTMGLLVTLSYFYPKYMFWFQLSMAIDVACHWFYLHTTILQGKTSHKFIDMNENPIMHIYYTNRTVLGFMCLGNELFYAALYLLYFTPGPLFLGVSTFKLLAVVTAPIAIVKTLISVIHGVVASVNITTIDAKEREDAKKRDQGKKSE
| Type | Start | End | Length |
| CDS |
22997 |
23048 |
52 |
| CDS |
23142 |
23276 |
135 |
| CDS |
23438 |
23755 |
318 |
| CDS |
23871 |
24040 |
170 |
| intron |
23049 |
23141 |
93 |
| intron |
23277 |
23437 |
161 |
| intron |
23756 |
23870 |
115 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_311768 |
AGAP003478-PA [Anopheles gambiae str. PEST] gb|EAA07376.3| AGAP003478-PA [Anopheles gambiae str. PEST] |
1e-105 |
| InterPro |
IPR000462 |
CDP-alcohol phosphatidyltransferase |
|
| InterPro |
IPR014387 |
CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote |
|
| Gene Ontology(BP) |
GO:0008654 |
phospholipid biosynthetic process |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0016780 |
phosphotransferase activity, for other substituted phosphate groups |
|
| Pfam |
PF01066.16 |
CDP-alcohol phosphatidyltransferase |
6.7e-19 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS201781PA |
| D. melanogaster |
FBgn0030670 |
| C. quinquefasciatus |
CPIJ003544 |
| A. gambiae |
AGAP003478 |
| B. mori |
BGIBMGA013145-TA |
| N. vitripennis |
NV12554-PA |
| P. humanus |
PHUM200790-PA |
| A. aegypti |
AAEL014142 |
| P. vanderplanki |
Pv.13812 |
| S. invicta |
SI2.2.0_15787 |
| H. sapiens |
ENSP00000457339 |
| A. mellifera |
GB19096-PA |
| H. sapiens |
ENSP00000219789 |
| H. sapiens |
ENSP00000454453 |
| M. musculus |
ENSMUSG00000030682 |
| T. castaneum |
TC015176 |
| H. melpomene |
HMEL008337-PA |