MidgeBase gene description page [Pn.05033]
Outline
| Gene ID | Pn.05033 |
| Type | Protein coding gene |
| Scaffold | PnScaf4323 |
| Start | 10826 |
| End | 11580 |
| Direction | - |
Sequence
Transcript: 369 (bp)
ATGTCTTCGCGGCTGTACAAATACATTATTAATGCCGCTGATAAGCGCGTGCCGCAATTCGTGAGACCTTTTTGGGAATATGAGGCCGGTCCGAAAACAATTTTTTTCTGGGCGCCTATGTGCAAGTGGGGACTTGTGCTTGCCGGCATCAAGGACTTGACACGACCGGCTGAGTTGCTGTCAGTTGAGCAAGCGTCTGCAATTGCTGCAACAGGTTACATCTACTCACGTTTCTCAATGGTCATTACGCCGAAGAACTACACCCTGCTGTCGGTGAACGTTTTCGTTGCCATCACGCAAACTATTCAAATTTTCCGAGCACTCAATTACAAGCACCAGCGAGGCGAGTTGTTTGCGGCGTGGAAAAAA
Protein: 123 (aa)
MSSRLYKYIINAADKRVPQFVRPFWEYEAGPKTIFFWAPMCKWGLVLAGIKDLTRPAELLSVEQASAIAATGYIYSRFSMVITPKNYTLLSVNVFVAITQTIQIFRALNYKHQRGELFAAWKK
| Type | Start | End | Length |
| CDS |
10829 |
11080 |
252 |
| CDS |
11150 |
11158 |
9 |
| CDS |
11473 |
11580 |
108 |
| intron |
11081 |
11149 |
69 |
| intron |
11159 |
11472 |
314 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_001040310 |
light-induced protein-like brain protein 44 [Bombyx mori] gb|ABD36190.1| light-induced protein-like brain protein 44 [Bombyx mori] |
7e-34 |
| InterPro |
IPR005336 |
Uncharacterised protein family UPF0041 |
|
| Pfam |
PF03650.8 |
Uncharacterised protein family (UPF0041) |
1.8e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.01772 |