MidgeBase gene description page [Pn.04940]
Outline
| Gene ID | Pn.04940 |
| Type | Protein coding gene |
| Scaffold | PnScaf4249 |
| Start | 2783 |
| End | 5263 |
| Direction | - |
Sequence
Transcript: 1866 (bp)
ATGAGTGAATCAAGGTGTTTCTTTGATATTCAAATCAAAAATATCGATGCGGGGAGGATAGTTTTCGAGCTATTCACTGATGTTTGTCCAAAGACGTGCGAAAACTTTCGATCCCTGTGTACGGGCGAGAAGGGAATCGGAAAAATTTCTCAAAAACCTCTTTACTATAAGGGCATAATTTTTCACAGAGTCGTAAAGAATTTCATGATCCAATCTGGCGATTTCGTAAACTCAAATGGATCCGGAGGAGAATCAATTTACGGAAAAACGTTCGAAGATGAAAACTTTACGCTCAAGCACGACAAGCCATTTCTTTTGTCGATGGCAAATCGTGGAAAAGACACAAACAGTTCTCAGTTCTTTATAACGACAGCACCTGCACCGCATTTAGACGGAATTCACACTGTATTCGGAAGGGTTGTCAGTGGCTCAGACATTGTCAAAGAAATTGAAAATCTACCTGTGGATCGCAATTCGAGGCCGATGGATGAAGCCAAAGTTAAGGCGTGTGGCGAGCTGGTGAAGCAAGTCAAAGAGAAAAAGGACAAGAAAAAGAAGAAGAAAGCGGCCAAAAGCGAATCCTCGACGTCCGCGAGCGAGTCCGAGTCTTCGTCTCAGTCTGAGCAGGAGAAACAGAAGAAGAAAAAGAAAAAGAAGCACAAGAAAAAATCCAAGAAAGCATCAAAGAAGAGAGACAACCACGAGTCTTCGGTCGAGGAGGGCGAGTTGAAATCCGATACCGAAGGGTTAAATCCGATGGTTACTGTGACCAAAATCGATCCAAGTGAAATTCCCGAAGTCAGCAACAAGTTCTTGCTGCGTGAAGAGCGACCGCGTGAGCGCAAAGACGACGACGGCAAGAACGGTCATGACAGACGCGACGGCGATCGTGAAAGGCGATTCGGATGGTCGAAGAAAAACTTGCCCCAGTCAAGGAGTGGACGTGTGATTAAGGGCCGCGGCAATTTCCGCTACCGCACACCGGTCAGATCGCGTTCTCGCTCAATCACGCCCGAACACTGGAAGGCGGCGACACGCAACACAATTAAGATGTCCGACTACGAAAGGATGGAAGAGGAGAAAAAAGTGAAGGAGGAGGAGATGAGACGACGTGCGGAGGAGCGAAAGCGCAGACACGAAGCAATAGCCAGAGGTGACGGCAAGAAGCCGTTCTTTGAAGTCAACCAGGAAATTACTGCCGCTGCAGCCGCCATCGTTGCCGTGCCAGAGATCTCAAAGGAACTCGAGAAGCAGACAATCAACGATGAACTTGACTACGAGGCAGATGAGATTGTGGACGAGGAGATTGACAAGAAGAAACTTGATTTGGCCAACAAGAGGGAGCGGGATGAAAAGTCGAGAGCGACAAGCAAACGCAGTAGGTCTCGTTCGCGTGACTTCGATAAGCGTTCGCGATGGCAAGACAAGAGAGATTATCGCGACAGGAGGAGCAACGACAGTCGTGGCTACAATCGATTTGATCGCTACGGGCGCAGAGATGAGCGAGAGAGAAACTCGCGTCGAAGCAGATCGCGCAGCAGTCGCAACAGACGTCGCTCGCATGATCGAGACTCGAGACGAAGAAGATCTTCATCGCATAGAAAATCGGCAGCTGACGAAAAGCGATCAAAGCACGATGAGAGAGAGGAGAAGAGCCCAAAAATCATCGATCCCAACGAGAAAGAGATAAGCGAACTTCAGCGAAAGGTCCTGGAAGCGAAACGAGTATTAGAGATAATGGTGAAGGAGAAGGAGGAGGAGCTGCAAAGAAAGGAGAAGAAGCGTAAGCGCTCGAGATCAAGATCATCCTCGTCAGAGAGGAAGCAGCGCAAGTCAAAGAGACACTCCGATTCCGATTCTGCGGAT
Protein: 622 (aa)
MSESRCFFDIQIKNIDAGRIVFELFTDVCPKTCENFRSLCTGEKGIGKISQKPLYYKGIIFHRVVKNFMIQSGDFVNSNGSGGESIYGKTFEDENFTLKHDKPFLLSMANRGKDTNSSQFFITTAPAPHLDGIHTVFGRVVSGSDIVKEIENLPVDRNSRPMDEAKVKACGELVKQVKEKKDKKKKKKAAKSESSTSASESESSSQSEQEKQKKKKKKKHKKKSKKASKKRDNHESSVEEGELKSDTEGLNPMVTVTKIDPSEIPEVSNKFLLREERPRERKDDDGKNGHDRRDGDRERRFGWSKKNLPQSRSGRVIKGRGNFRYRTPVRSRSRSITPEHWKAATRNTIKMSDYERMEEEKKVKEEEMRRRAEERKRRHEAIARGDGKKPFFEVNQEITAAAAAIVAVPEISKELEKQTINDELDYEADEIVDEEIDKKKLDLANKRERDEKSRATSKRSRSRSRDFDKRSRWQDKRDYRDRRSNDSRGYNRFDRYGRRDERERNSRRSRSRSSRNRRRSHDRDSRRRRSSSHRKSAADEKRSKHDEREEKSPKIIDPNEKEISELQRKVLEAKRVLEIMVKEKEEELQRKEKKRKRSRSRSSSSERKQRKSKRHSDSDSAD
| Type | Start | End | Length |
| CDS |
2786 |
3107 |
322 |
| CDS |
3183 |
4031 |
849 |
| CDS |
4119 |
4278 |
160 |
| CDS |
4344 |
4483 |
140 |
| CDS |
4618 |
4647 |
30 |
| CDS |
4796 |
4989 |
194 |
| CDS |
5093 |
5263 |
171 |
| intron |
3108 |
3182 |
75 |
| intron |
4032 |
4118 |
87 |
| intron |
4279 |
4343 |
65 |
| intron |
4484 |
4617 |
134 |
| intron |
4648 |
4795 |
148 |
| intron |
4990 |
5092 |
103 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_311948 |
AGAP002952-PA [Anopheles gambiae str. PEST] gb|EAA08127.6| AGAP002952-PA [Anopheles gambiae str. PEST] |
1e-122 |
| InterPro |
IPR002130 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(MF) |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
|
| Pfam |
PF00160.16 |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
5.8e-47 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB16997-PA |
| H. melpomene |
HMEL004018-PA |
| H. sapiens |
ENSP00000402222 |
| H. sapiens |
ENSP00000260970 |
| D. melanogaster |
FBgn0039581 |
| H. sapiens |
ENSP00000408683 |
| P. humanus |
PHUM050610-PA |
| H. sapiens |
ENSP00000435987 |
| H. sapiens |
ENSP00000386245 |
| A. gambiae |
AGAP002952 |
| P. vanderplanki |
Pv.13966 |
| H. sapiens |
ENSP00000407083 |
| C. quinquefasciatus |
CPIJ012033 |
| T. castaneum |
TC004244 |
| M. musculus |
ENSMUSG00000042133 |
| P. vanderplanki |
Pv.13965 |
| S. invicta |
SI2.2.0_06109 |
| D. plexippus |
DPOGS204432PA |
| A. aegypti |
AAEL005799 |