MidgeBase gene description page [Pn.04914]
Outline
| Gene ID | Pn.04914 |
| Type | Protein coding gene |
| Scaffold | PnScaf4227 |
| Start | 258 |
| End | 2361 |
| Direction | + |
Sequence
Transcript: 1470 (bp)
ATGGCAACTGAAGCTAAAAATGAAAAGCCAACATCAGCAGCGATAGCAGAGGCCGAAAAATACAAAGAACAAGCCAATGAATACTTCAAGAATAAAATCTATGATAAGGCGATTGAATATTATTCCAAGGCCCTCGAGTTGGATCCAGATAATGCAGTGTATTATGCCAATCGCTCGCTCGCAAACTTACGAACAGAACTCTTTGGTTGTGCTCTACAAGATGCTATCAGCTCTGTGAAAGCGGATCCTGGCTATCTTAAAGCTTATTATAGAAGAGCGGCTGCTCACATGTCTCTGGGAAAATTCAAGTTGGCCCTTGCTGATTTTGAAATTGTGAGCAAGAGACGACCAAATGATGCTGATGCAAAAAAAAAATTTGTCGAATGCAACAAGATTGTAAAAAAAATTGCATTTGAGCGTGCAATTGCAGTAGACAAACCGGAAAAAACCCTAGCAGAAATGTATCAGAGCTTAGAAGCGATCTCAATTGAAGATGATTATTGTGGACCAGTTCTTTCTGAGTCAACTGGAATCACACTAGAGTTCATGAAAGAGTTAATGGAATGGTACAAAGATCAAAAAAAGCTGCATAAAAAATTTGCCTACAAGATTCTCTATGACATCGATTTCTATCTTAGATCACAACCGTCTCTAGTCGATATAAAAATTCCTGATGAAGCGAAATTTACTATTTGTGGTGACATTCACGGGCAATTTTACGATTTGCTCAACATTTTCGAGAAGAATGGGCTTCCTTCTGAGACAAATATGATGCTCTTCAATGGAGATTTCGTTGATAGAGGATCATTTTCCGTTGAGTGCATATTCACACTTTTTGGCTTCAAATTGCTCTATCCTAATCACTTTTTCATGAGCCGCGGCAACCATGAGTCTGTCAACATGAACCAGATGTATGGCTTTACAGGAGAAGTTACAGCAAAATATAATAGCTCTATGGCTGACATGTTCACCCAGGTTTTCAATTTTTTGCCTTTATCACATTTGCTGAACGAAAAAGTTTTCGTCTGTCACGGTGGCCTATTCTCGTCCGATGACGTTACAATCGACGATTTGCGTAAAATCGACCGAAATCGACAACCACCAGAAGAGGGACTTATGTGCGAGCTATTGTGGTCGGATCCACAAGCCAATAACGGTAGAGCACCATCTAAAAGAGGAGTAGGATGCCAATTCGGACCGGATGTTACTGAGAATTTCCTGAAAAAAAATAATTTGGAGTATATTGTACGCTCGCACGAAGTGAAAGATATGGGATATGAAATTGCTCACAACGGAAAATGCATCACTGTGTTTTCTGCTCCAAATTATTGCGATACTATGGGAAACAAAGGAGCATACATCAATCTAAAGGGAAAAAATATGAAGCCAACATTTGAAGTTTTCGATGCCGTACCTCATCCAAATGTGAAACCAATGATGTATGCATCATCCTTAATGAATTTGATTATG
Protein: 490 (aa)
MATEAKNEKPTSAAIAEAEKYKEQANEYFKNKIYDKAIEYYSKALELDPDNAVYYANRSLANLRTELFGCALQDAISSVKADPGYLKAYYRRAAAHMSLGKFKLALADFEIVSKRRPNDADAKKKFVECNKIVKKIAFERAIAVDKPEKTLAEMYQSLEAISIEDDYCGPVLSESTGITLEFMKELMEWYKDQKKLHKKFAYKILYDIDFYLRSQPSLVDIKIPDEAKFTICGDIHGQFYDLLNIFEKNGLPSETNMMLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMSRGNHESVNMNQMYGFTGEVTAKYNSSMADMFTQVFNFLPLSHLLNEKVFVCHGGLFSSDDVTIDDLRKIDRNRQPPEEGLMCELLWSDPQANNGRAPSKRGVGCQFGPDVTENFLKKNNLEYIVRSHEVKDMGYEIAHNGKCITVFSAPNYCDTMGNKGAYINLKGKNMKPTFEVFDAVPHPNVKPMMYASSLMNLIM
| Type | Start | End | Length |
| CDS |
258 |
348 |
91 |
| CDS |
560 |
1177 |
618 |
| CDS |
1304 |
1394 |
91 |
| CDS |
1535 |
1844 |
310 |
| CDS |
1911 |
2226 |
316 |
| CDS |
2315 |
2358 |
44 |
| intron |
349 |
559 |
211 |
| intron |
1178 |
1303 |
126 |
| intron |
1395 |
1534 |
140 |
| intron |
1845 |
1910 |
66 |
| intron |
2227 |
2314 |
88 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001964468 |
GF23034 [Drosophila ananassae] gb|EDV30264.1| GF23034 [Drosophila ananassae] |
0.0 |
| InterPro |
IPR001440 |
Tetratricopeptide TPR-1 |
|
| InterPro |
IPR004843 |
Metallophosphoesterase domain |
|
| InterPro |
IPR011990 |
Tetratricopeptide-like helical |
|
| InterPro |
IPR011236 |
Serine/threonine protein phosphatase 5 |
|
| InterPro |
IPR013235 |
PPP domain |
|
| InterPro |
IPR013026 |
Tetratricopeptide repeat-containing domain |
|
| InterPro |
IPR019734 |
Tetratricopeptide repeat |
|
| InterPro |
IPR006186 |
Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase |
|
| Gene Ontology(BP) |
GO:0006470 |
protein dephosphorylation |
|
| Gene Ontology(CC) |
GO:0005634 |
nucleus |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0004721 |
phosphoprotein phosphatase activity |
|
| Pfam |
PF07719.12 |
Tetratricopeptide repeat |
9e-12 |
| Pfam |
PF13174.1 |
Tetratricopeptide repeat |
0.0061 |
| Pfam |
PF13176.1 |
Tetratricopeptide repeat |
0.0012 |
| Pfam |
PF13428.1 |
Tetratricopeptide repeat |
6.4e-08 |
| Pfam |
PF13424.1 |
Tetratricopeptide repeat |
0.0093 |
| Pfam |
PF00149.23 |
Calcineurin-like phosphoesterase |
9.5e-43 |
| Pfam |
PF13432.1 |
Tetratricopeptide repeat |
7.1e-08 |
| Pfam |
PF00515.23 |
Tetratricopeptide repeat |
7.7e-16 |
| Pfam |
PF13414.1 |
TPR repeat |
5.3e-22 |
| Pfam |
PF13371.1 |
Tetratricopeptide repeat |
0.00065 |
| Pfam |
PF08321.7 |
PPP5 TPR repeat region |
1.3e-32 |
| Pfam |
PF13431.1 |
Tetratricopeptide repeat |
2.4e-05 |
| Pfam |
PF13181.1 |
Tetratricopeptide repeat |
2.6e-07 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM219770-PA |
| A. aegypti |
AAEL005080 |
| P. vanderplanki |
Pv.05642 |
| H. sapiens |
ENSP00000012443 |
| S. invicta |
SI2.2.0_00250 |
| M. musculus |
ENSMUSG00000003099 |
| H. sapiens |
ENSP00000375786 |
| H. melpomene |
HMEL005000-PA |
| H. sapiens |
ENSP00000434329 |
| A. mellifera |
GB12422-PA |
| A. gambiae |
AGAP004151 |
| N. vitripennis |
NV18433-PA |
| D. melanogaster |
FBgn0005777 |
| C. quinquefasciatus |
CPIJ009620 |
| H. melpomene |
HMEL005262-PA |
| T. castaneum |
TC008963 |
| D. plexippus |
DPOGS202700PA |
| B. mori |
BGIBMGA004807-TA |