MidgeBase gene description page [Pn.04907]
Outline
| Gene ID | Pn.04907 |
| Type | Protein coding gene |
| Scaffold | PnScaf4223 |
| Start | 16247 |
| End | 26520 |
| Direction | - |
Sequence
Transcript: 2742 (bp)
ATGGCGGACGAAGAACAATTTTCACTTTGTTGGAATAATTTCAACACAAACTTATCGGCGGGCTTTCACGAATCGCTCTGCCGCGGTGATCTCGTTGATGTAACTTTAGCCGCAGAGGGCCAACTTGTTAAAGCACACCGTCTTGTGCTCTCAGTGTGCTCGCCATACTTTCGAAAGATGTTCACCCAAATGCCCGCCAACCAGCACGCATTTGTTTTCCTAAAAGATGTGAGCGCGACTGCATTGAAAGACCTAATTCAATTTATGTATTGCGGAGAAGTTAATGTTAAGCAAGAAGCATTGCCTGCATTTATCAGCACAGCCGAAGCACTTCAAATTAAGGGACTCACAGAATCGGTAAGAGACGAGTCATCTACCATTAAAACCGCTCGTATCATCACGACGCGTCCGCAAACATTCAAACTTGAATCTGAAGGAAGTAGCGATGAGAAGCACACTGTCGCATTAGTACAAACTACTCAGCCAATTAAACGTGTCGCGCGTCAGACTATTACTGCTGTCGCACCAAAGCGCGCAAAGACTCAAATTAGCCAAGATAACCCTGACCCGCTCGATGCCCCGGACCACGAAATTGTATCACCGCAACAGCTTAAGGAAACAACGGAATTCATTGATTTGCCAATCGAATCAAACACGCTTAACCCCAAGACCGAACCGGAATATGTTGAGGACACACAAGAAGTTGAGACTGAACAGGACGATGACAACCAATATGTAGAAGACGTTACCTATGGCGAAGAGAAATACGAGGAATCATACTTCACCGAAGGCGATGCAGACAAGGCTGGCGTATCTGGATTTAGCGAAACATATGCAACAGAAGGCGATCAATCGGCAACGGAAGCACAAGAATATCAATATATTGAAACGGAGGCTTTACATATTCAGTATTCATCAAAATTGTCGAATAAGAAATATGAGTATGCGGAATATGAGCAACAGAATATCTCGATAGAAGAGGAACAGTCTGAACTCACTTTTATTACCACTCCCTGGTCAACCAAATGCCTCGCTCATAATAATTATCTCTACAATTGCCACAGTACTCACGGAAACAAGACTTATTACCGGTGCCACAATTACTCAAAGAAGGTGAAAGAAGAGCGCTGTCGTGCACGATGTCTAGTTTCGAACGGAAGAATAATTTCGTTCACAGGTGGAAAGCACAACCATCCACCGCACACCGATAAAATTGAGAAAATTTGCAAAAAGGAACTTGAGCATTATCCCGTAGGTGTCTGGACGTCGATCGGCCACGAATATACGACGTCGGAAAATGGCAGTGAACTACTTAAATTGGCTAATGGTTATTTGTACCGAAAGGAAGCAAAGTTCAAGAATCACACTGAGTGGGTTTGCGTGAATAATAATGTAAAATCGAAACGCTTTTATTCGCTAATGGGCACAACTTCATCTGGAAAGAAGACGAGAAAAATTATGCCGAAAGAAGAGTACATTGACGATATAGACTACGCAGGTGGCGACTATGTGATTCCACAGTACAAGCAGAGCAGGCAAAAAAACTTGCAACTCCTGCACAATGGTTATGTATACTGTCGAGATAGCAACAGAGGACTCCGAGTTTACTGGAGATAATATGAAGACGATACGATTGCACGCTACTCGCAGACCACTCGTGGAAAGACACAGCTGCTTTACTTGGGCCAACCGTTCGTATTTGAAAAGGACGTCAAGGGACAAAATAATACTGTTGAAAGAAAAGTCTGGCGTTGTAATCAATGGTGGAATGAGAAGTGTCGTGCACAATATGAAATCATTAGCATCGCTTCGCCCCAAAAACTTCCGGTCATCACATCGACGTCAGCAGTTTTTCTCGAAAGTCCCGATCAGTTGCACTGCAAAGCTGATCCGTCGATGATGGCTCTGCACAACGGCAGCAAAGTTTACGTCAAGAAGGCAGACATTCTGAAGATCTTTTGCGACAAACCTGGACTTTATAGCGGTCGTCTGGCGACTCTTATATTTGATAATATCAAGGGAACATTCTATCCTCCACAAGATTCCGACAAGAACATTCGCTACCTCACAACACCTCATGGACGATTTCAACTCTACTACAATGGCTATCTTTACAACCGCAACATGTCTTCACAACAGAAAACGTACTGGAGATGCACGATGAACGGGAAATTGAAGTGCTCTGCACGCATCATTGGCACTCCGAACGGCTTTACTCTCTCAAAGCCACAGCATAATCACGAGCCAATCGACTTTCCAGAAGAAAAGGCTCGTCGGAGTTTCAAAGTTGACAAATATACTACGTTCATCGCGTCGCGTTCAGGACAGCAGCTCTGCTCCGTGAAAGGAAAACTCTACAAGAAGACGAAGGGACGAATGTATCGCAGTTATTTCTCGTGCATAGAGAACAATTGCGATGCAGAGATAGTGGTCAATGATCTCAAGGATCTTCTCGAGCCATTGAATCCGCAACTGTTGAGGTGTGGCGAGACGCAAGTAATGTATCAGGGTGTTCTATTCTACCGAAGTAATTACGTGAGATACGTGACGGGTTTTCGAGGATCGAGGAAGCTTAAAGTCGGCGATTATTCATTTACAAAGAACAAGATTTCTGGACACAAAATGTATTGGTCATGTGCCAGAGCTGGATTGCATAAATGTAAAGCACGCGTTGTGACCACGGATGTCGATGGCGAGCAGCATTTGATTGTGAAAAACGCAAAGCACAATCATGAACCCTTC
Protein: 914 (aa)
MADEEQFSLCWNNFNTNLSAGFHESLCRGDLVDVTLAAEGQLVKAHRLVLSVCSPYFRKMFTQMPANQHAFVFLKDVSATALKDLIQFMYCGEVNVKQEALPAFISTAEALQIKGLTESVRDESSTIKTARIITTRPQTFKLESEGSSDEKHTVALVQTTQPIKRVARQTITAVAPKRAKTQISQDNPDPLDAPDHEIVSPQQLKETTEFIDLPIESNTLNPKTEPEYVEDTQEVETEQDDDNQYVEDVTYGEEKYEESYFTEGDADKAGVSGFSETYATEGDQSATEAQEYQYIETEALHIQYSSKLSNKKYEYAEYEQQNISIEEEQSELTFITTPWSTKCLAHNNYLYNCHSTHGNKTYYRCHNYSKKVKEERCRARCLVSNGRIISFTGGKHNHPPHTDKIEKICKKELEHYPVGVWTSIGHEYTTSENGSELLKLANGYLYRKEAKFKNHTEWVCVNNNVKSKRFYSLMGTTSSGKKTRKIMPKEEYIDDIDYAGGDYVIPQYKQSRQKNLQLLHNGYVYCRDSNRGLRVYWRXYEDDTIARYSQTTRGKTQLLYLGQPFVFEKDVKGQNNTVERKVWRCNQWWNEKCRAQYEIISIASPQKLPVITSTSAVFLESPDQLHCKADPSMMALHNGSKVYVKKADILKIFCDKPGLYSGRLATLIFDNIKGTFYPPQDSDKNIRYLTTPHGRFQLYYNGYLYNRNMSSQQKTYWRCTMNGKLKCSARIIGTPNGFTLSKPQHNHEPIDFPEEKARRSFKVDKYTTFIASRSGQQLCSVKGKLYKKTKGRMYRSYFSCIENNCDAEIVVNDLKDLLEPLNPQLLRCGETQVMYQGVLFYRSNYVRYVTGFRGSRKLKVGDYSFTKNKISGHKMYWSCARAGLHKCKARVVTTDVDGEQHLIVKNAKHNHEPF
| Type | Start | End | Length |
| CDS |
16250 |
16461 |
212 |
| CDS |
16900 |
16983 |
84 |
| CDS |
17194 |
17340 |
147 |
| CDS |
17512 |
17666 |
155 |
| CDS |
17731 |
17866 |
136 |
| CDS |
18303 |
18524 |
222 |
| CDS |
18877 |
19047 |
171 |
| CDS |
19419 |
19426 |
8 |
| CDS |
19503 |
19701 |
199 |
| CDS |
19932 |
20096 |
165 |
| CDS |
21715 |
21848 |
134 |
| CDS |
21917 |
22154 |
238 |
| CDS |
25489 |
25974 |
486 |
| CDS |
26136 |
26520 |
385 |
| intron |
16462 |
16899 |
438 |
| intron |
16984 |
17193 |
210 |
| intron |
17341 |
17511 |
171 |
| intron |
17667 |
17730 |
64 |
| intron |
17867 |
18302 |
436 |
| intron |
18525 |
18876 |
352 |
| intron |
19048 |
19418 |
371 |
| intron |
19427 |
19502 |
76 |
| intron |
19702 |
19931 |
230 |
| intron |
20097 |
21714 |
1618 |
| intron |
21849 |
21916 |
68 |
| intron |
22155 |
25488 |
3334 |
| intron |
25975 |
26135 |
161 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654666 |
modifier of mdg4 [Aedes aegypti] gb|EAT37414.1| modifier of mdg4 [Aedes aegypti] |
1e-116 |
| InterPro |
IPR007588 |
Zinc finger, FLYWCH-type |
|
| InterPro |
IPR013069 |
BTB/POZ |
|
| InterPro |
IPR011333 |
BTB/POZ fold |
|
| InterPro |
IPR000210 |
BTB/POZ-like |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF04500.11 |
FLYWCH zinc finger domain |
7.8e-63 |
| Pfam |
PF00651.26 |
BTB/POZ domain |
4.5e-25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA006426-TA |
| A. aegypti |
AAEL010576 |
| A. gambiae |
AGAP003439 |
| P. humanus |
PHUM397860-PA |
| P. vanderplanki |
Pv.13205 |
| P. humanus |
PHUM132190-PA |
| C. quinquefasciatus |
CPIJ001652 |
| D. plexippus |
DPOGS208236PA |
| D. melanogaster |
FBgn0002781 |
| T. castaneum |
TC011439 |
| P. humanus |
PHUM580680-PA |
| H. melpomene |
HMEL008212-PA |
| D. melanogaster |
FBgn0261837 |