MidgeBase gene description page [Pn.04880]
Outline
| Gene ID | Pn.04880 |
| Type | Protein coding gene |
| Scaffold | PnScaf4205 |
| Start | 1410 |
| End | 4363 |
| Direction | - |
Sequence
Transcript: 1647 (bp)
ATGCCTGAAAAAGACTTTCTGATCGAATTGAAGCGCGGAGTTGTTCGGTCATATAAATTCGCTCCGATCATCATGCTGGCGTTCATTCTATTTGTTGCGGCAATTGTTTTGCTCTACAAATATGGGACCAGAAACTTCGATTACTTCCAAAAGAAGGGCCTTCCTTACCACAAACCTCATCCATTCGTCGGTTCCCGTTTGAGCACAATTATGAGGACGAAGAACATGGTCGAGTTCTTGGATGAGGTTTATTACGAATTCAGAGACGAAAAAATTTCTGGAATGTTTGAATTCAATCGACCTACATACTTCATGCGCGATCCCGAGCTCATTAAGCGCCTCGCCATCAAAGAGTTTGACTCGTTCACCGATCATCGCATGATTATCTCGAAAGACGCTGAGCCGCTGTTTGCAAAGGGAATTTTCGGGATGACCGGCCAAAAGTGGAAAGATATGCGCGCCACTCTGTCGCCCGCATTCACTGGCAGCAAAATGCGTCTGATGTTCAAGCTCATCAATGAAGTCGGCTCTCAGATGTCCAACACAGTGAAGGAGCAAATTAAGAATGGCGCAAACAACCAAGTCGAGTTCAAAGAGTTTGCACAAAAATTCGCTATTGACATAATCGCCACGTGCGCCTTCGGTATCGAGATCAACTCGTTCACGAATCCAAACAATGATTTCCTCAGAATTGCAAGGCATGCCATGAATTTCCAATCTTTCGACAAAGGTTTGCGACTCATTGGCTTGCTCGCTTTTCCATGGCTCATGAAAAAGCTGAAGATCAAATTTCTAGACAAGGAGTTTTACGAATTTTTCGAACCAGTGATTGCTGAAACTATTAAGACGAGAGAAGAGAAAGGCATCACTCGAAACGACATGATTGACTTAATTATTGAAGCCAAGCATGGCAAGTTGACGCACGATCACGAGGAAACCCCAGCCGATGGATTCGCAATGGTTGAGGAGTCTCATGTCGGCAAGGAGAAGGTCAAGAAAACCTGGGAGGATGAGGAGCTCATCGCACAGTGCTTCGGCTTCTTCTTCGGAGGATTCGAGACAGTTTCAAGTGTCATGACTTTCATGGCTTACGAGCTAGTCATCGATCAAGATATCCAAAAGAAACTGCAGGAAGAAATCGACCAGGTGCACGAGTCGCTTAACGGTGGTGCTCTCACCTACGATCACGTTCAAAAAATGAAGTACATGGACATGGTGTTGTGCGAGACTCTCCGCAAGTGGCCACCGGCACCCATTACCGACAGAATGTGCACAAAGGAGTTTACGGTTGAGTACGACGACAAAAAGTTCGTGATGGAATACGACAGGAACTTTTACATACCGATCTACTCGCTTCACAACGACGAAAAATACTTCCCGAACCCGAAGAAGTTTGATCCCGATCGATTCAGCGACGAGAACAAGAAGAATATTCCTCAAGATTGCTACATACCCTTCGGAGTTGGCCCGAGAAACTGCGTTGGAAACCGCTTTGCACTTTTGGAAGTCAAAACCATTTTTTACTACCTCTTGCTGAACTTTAACTTCGAACCGACCAAGGACACTCAGATTCCGATAAAATTGGGGCCAAGCCAAGCCTCATTGAACCCTGAAAATGGATTGAGATGCGCCATCGTTCCGAGATCT
Protein: 549 (aa)
MPEKDFLIELKRGVVRSYKFAPIIMLAFILFVAAIVLLYKYGTRNFDYFQKKGLPYHKPHPFVGSRLSTIMRTKNMVEFLDEVYYEFRDEKISGMFEFNRPTYFMRDPELIKRLAIKEFDSFTDHRMIISKDAEPLFAKGIFGMTGQKWKDMRATLSPAFTGSKMRLMFKLINEVGSQMSNTVKEQIKNGANNQVEFKEFAQKFAIDIIATCAFGIEINSFTNPNNDFLRIARHAMNFQSFDKGLRLIGLLAFPWLMKKLKIKFLDKEFYEFFEPVIAETIKTREEKGITRNDMIDLIIEAKHGKLTHDHEETPADGFAMVEESHVGKEKVKKTWEDEELIAQCFGFFFGGFETVSSVMTFMAYELVIDQDIQKKLQEEIDQVHESLNGGALTYDHVQKMKYMDMVLCETLRKWPPAPITDRMCTKEFTVEYDDKKFVMEYDRNFYIPIYSLHNDEKYFPNPKKFDPDRFSDENKKNIPQDCYIPFGVGPRNCVGNRFALLEVKTIFYYLLLNFNFEPTKDTQIPIKLGPSQASLNPENGLRCAIVPRS
| Type | Start | End | Length |
| CDS |
1413 |
1587 |
175 |
| CDS |
1644 |
2464 |
821 |
| CDS |
2577 |
2743 |
167 |
| CDS |
2835 |
2867 |
33 |
| CDS |
2929 |
3107 |
179 |
| CDS |
3217 |
3441 |
225 |
| CDS |
3619 |
3644 |
26 |
| CDS |
4343 |
4363 |
21 |
| intron |
1588 |
1643 |
56 |
| intron |
2465 |
2576 |
112 |
| intron |
2744 |
2834 |
91 |
| intron |
2868 |
2928 |
61 |
| intron |
3108 |
3216 |
109 |
| intron |
3442 |
3618 |
177 |
| intron |
3645 |
4342 |
698 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001855237 |
cytochrome P450 9b2 [Culex quinquefasciatus] gb|EDS34510.1| cytochrome P450 9b2 [Culex quinquefasciatus] |
1e-134 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
4.2e-86 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.11800 |
| Pn.12848 |
| Pn.02441 |
| Pn.02442 |
| Pn.06482 |
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV10995-PA |
| T. castaneum |
TC005365 |
| C. quinquefasciatus |
CPIJ800231 |
| H. sapiens |
ENSP00000342969 |
| H. sapiens |
ENSP00000346607 |
| T. castaneum |
TC006443 |
| A. gambiae |
AGAP012296 |
| A. aegypti |
AAEL006798 |
| D. melanogaster |
FBgn0033775 |
| T. castaneum |
TC005384 |
| A. aegypti |
AAEL014609 |
| A. aegypti |
AAEL014614 |
| N. vitripennis |
NV13927-PA |
| A. aegypti |
AAEL006804 |
| H. sapiens |
ENSP00000337915 |
| N. vitripennis |
NV15331-PA |
| C. quinquefasciatus |
CPIJ800240 |
| S. invicta |
SI2.2.0_80332 |
| D. melanogaster |
FBgn0038037 |
| S. invicta |
SI2.2.0_02683 |
| A. aegypti |
AAEL014607 |
| C. quinquefasciatus |
CPIJ800222 |
| T. castaneum |
TC001546 |
| A. aegypti |
AAEL006802 |
| A. mellifera |
GB19055-PA |
| A. aegypti |
AAEL014611 |
| D. plexippus |
DPOGS201665PA |
| A. mellifera |
GB19820-PA |
| C. quinquefasciatus |
CPIJ800228 |
| T. castaneum |
TC005351 |
| H. melpomene |
HMEL013741-PA |
| M. musculus |
ENSMUSG00000056035 |
| P. vanderplanki |
Pv.14795 |
| C. quinquefasciatus |
CPIJ800224 |
| T. castaneum |
TC006441 |
| N. vitripennis |
NV17758-PA |
| D. melanogaster |
FBgn0015040 |
| H. sapiens |
ENSP00000222982 |
| T. castaneum |
TC005354 |
| C. quinquefasciatus |
CPIJ800226 |
| A. aegypti |
AAEL014605 |
| A. aegypti |
AAEL014612 |
| A. aegypti |
AAEL017175 |
| C. quinquefasciatus |
CPIJ800233 |
| A. aegypti |
AAEL006814 |
| C. quinquefasciatus |
CPIJ800235 |
| A. aegypti |
AAEL014617 |
| H. melpomene |
HMEL013737-PA |
| B. mori |
BGIBMGA005346-TA |
| S. invicta |
SI2.2.0_80741 |
| A. aegypti |
AAEL006784 |
| T. castaneum |
TC006442 |
| H. melpomene |
HMEL012008-PA |
| C. quinquefasciatus |
CPIJ800237 |
| H. sapiens |
ENSP00000312110 |
| D. melanogaster |
FBgn0015038 |
| A. aegypti |
AAEL014610 |
| A. gambiae |
AGAP012294 |
| A. gambiae |
AGAP012850 |
| M. musculus |
ENSMUSG00000075551 |
| A. aegypti |
AAEL014618 |
| H. melpomene |
HMEL013738-PA |
| N. vitripennis |
NV13020-PA |
| T. castaneum |
TC015219 |
| N. vitripennis |
NV15332-PA |
| M. musculus |
ENSMUSG00000061292 |
| D. plexippus |
DPOGS201160PA |
| T. castaneum |
TC006444 |
| B. mori |
BGIBMGA003944-TA |
| A. aegypti |
AAEL006815 |
| A. mellifera |
GB17793-PA |
| P. vanderplanki |
Pv.10768 |
| S. invicta |
SI2.2.0_07302 |
| T. castaneum |
TC015218 |
| T. castaneum |
TC005385 |
| N. vitripennis |
NV10996-PA |
| S. invicta |
SI2.2.0_80135 |
| T. castaneum |
TC015487 |
| A. aegypti |
AAEL006805 |
| A. aegypti |
AAEL014619 |
| C. quinquefasciatus |
CPIJ800229 |
| T. castaneum |
TC005352 |
| N. vitripennis |
NV10614-PA |
| N. vitripennis |
NV10613-PA |
| A. aegypti |
AAEL006793 |
| H. melpomene |
HMEL013742-PA |
| A. mellifera |
GB14836-PA |
| S. invicta |
SI2.2.0_11458 |
| A. aegypti |
AAEL006795 |
| P. vanderplanki |
Pv.13750 |
| C. quinquefasciatus |
CPIJ800230 |
| B. mori |
BGIBMGA003943-TA |
| H. sapiens |
ENSP00000222382 |
| A. aegypti |
AAEL002638 |
| M. musculus |
ENSMUSG00000038656 |
| P. humanus |
PHUM417180-PA |
| N. vitripennis |
NV13021-PA |
| C. quinquefasciatus |
CPIJ800223 |
| A. aegypti |
AAEL014615 |
| A. aegypti |
AAEL014603 |
| T. castaneum |
TC005387 |
| H. sapiens |
ENSP00000337450 |
| P. humanus |
PHUM417190-PA |
| A. aegypti |
AAEL014608 |
| M. musculus |
ENSMUSG00000029727 |
| P. vanderplanki |
Pv.17694 |
| B. mori |
BGIBMGA003945-TA |
| N. vitripennis |
NV10997-PA |
| C. quinquefasciatus |
CPIJ800225 |
| A. mellifera |
GB16803-PA |
| H. sapiens |
ENSP00000346887 |
| A. aegypti |
AAEL014604 |
| T. castaneum |
TC005353 |
| C. quinquefasciatus |
CPIJ800236 |
| C. quinquefasciatus |
CPIJ800234 |
| T. castaneum |
TC000282 |
| M. musculus |
ENSMUSG00000054417 |
| A. aegypti |
AAEL014616 |
| A. gambiae |
AGAP012295 |
| A. aegypti |
AAEL006811 |
| A. mellifera |
GB19967-PA |
| A. aegypti |
AAEL006810 |
| B. mori |
BGIBMGA003957-TA |
| H. melpomene |
HMEL013738-PB |
| A. aegypti |
AAEL002633 |
| C. quinquefasciatus |
CPIJ800227 |
| S. invicta |
SI2.2.0_07988 |
| N. vitripennis |
NV12675-PA |
| A. aegypti |
AAEL014613 |
| D. melanogaster |
FBgn0015039 |
| M. musculus |
ENSMUSG00000075552 |
| A. aegypti |
AAEL008846 |
| P. vanderplanki |
Pv.10370 |
| N. vitripennis |
NV15333-PA |
| A. aegypti |
AAEL014606 |
| T. castaneum |
TC006445 |
| A. gambiae |
AGAP012292 |
| C. quinquefasciatus |
CPIJ800232 |
| N. vitripennis |
NV18050-PA |
| A. gambiae |
AGAP000818 |
| T. castaneum |
TC005386 |
| H. melpomene |
HMEL013739-PA |
| P. vanderplanki |
Pv.11267 |
| S. invicta |
SI2.2.0_11819 |