MidgeBase gene description page [Pn.04766]
Outline
| Gene ID | Pn.04766 |
| Type | Protein coding gene |
| Scaffold | PnScaf4083 |
| Start | 31638 |
| End | 32290 |
| Direction | + |
Sequence
Transcript: 324 (bp)
ATGGCATCTCAAGTATTGAAGAGAGGCATCCAAACGGCCTCGGCCAACCTCGCAAATCCAGGAACAGCTGCTCAGGCCGGACATGGCGGTGGCTGGAAGTTGTGGAAACGCCTTTCATTCTTCGTCGCTATTCCCGGTGTTGCTGTGTGTATGTTGAACACATATTTGGAACACCAGAAGCACCCACATCAACGTCCAGACTTCGTTCCATACGAATACTTGAGAATCCGCAACAAACGATTCCCATGGGGTGATGGAAACAAGAGCTTCTTCCACAACCCACATGTCAACGCATTACCTGATGGCTATGAGGATGAACACCAT
Protein: 108 (aa)
MASQVLKRGIQTASANLANPGTAAQAGHGGGWKLWKRLSFFVAIPGVAVCMLNTYLEHQKHPHQRPDFVPYEYLRIRNKRFPWGDGNKSFFHNPHVNALPDGYEDEHH
| Type | Start | End | Length |
| CDS |
31638 |
31725 |
88 |
| CDS |
31988 |
32175 |
188 |
| CDS |
32240 |
32287 |
48 |
| intron |
31726 |
31987 |
262 |
| intron |
32176 |
32239 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001656628 |
cytochrome c oxidase, subunit VIA, putative [Aedes aegypti] gb|ABF18103.1| cytochrome c oxidase subunit VIa/COX13 [Aedes aegypti] gb|EAT45482.1| cytochrome c oxidase, subunit VIA, putative [Aedes aegypti] |
4e-32 |
| InterPro |
IPR001349 |
Cytochrome c oxidase, subunit VIa |
|
| InterPro |
IPR018507 |
Cytochrome c oxidase, subunit VIa, conserved site |
|
| Gene Ontology(CC) |
GO:0005743 |
mitochondrial inner membrane |
|
| Gene Ontology(CC) |
GO:0005751 |
mitochondrial respiratory chain complex IV |
|
| Gene Ontology(MF) |
GO:0004129 |
cytochrome-c oxidase activity |
|
| Pfam |
PF02046.10 |
Cytochrome c oxidase subunit VIa |
1e-29 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS207824PA |
| P. humanus |
PHUM274850-PA |
| S. invicta |
SI2.2.0_07313 |
| C. quinquefasciatus |
CPIJ004219 |
| H. sapiens |
ENSP00000229379 |
| A. mellifera |
GB10253-PA |
| H. sapiens |
ENSP00000287490 |
| T. castaneum |
TC006519 |
| H. sapiens |
ENSP00000404078 |
| M. musculus |
ENSMUSG00000041697 |
| D. melanogaster |
FBgn0050093 |
| D. melanogaster |
FBgn0034877 |
| M. musculus |
ENSMUSG00000030785 |
| P. vanderplanki |
Pv.13072 |
| A. gambiae |
AGAP008850 |
| A. gambiae |
AGAP000851 |
| A. aegypti |
AAEL000929 |
| N. vitripennis |
NV13153-PA |
| B. mori |
BGIBMGA005511-TA |
| A. aegypti |
AAEL003234 |