MidgeBase gene description page [Pn.04452]
Outline
| Gene ID | Pn.04452 |
| Type | Protein coding gene |
| Scaffold | PnScaf3705 |
| Start | 53491 |
| End | 54501 |
| Direction | - |
Sequence
Transcript: 939 (bp)
ATGGGTTCGTGGGAGGAATTTTACGCCAATCACTTGCCACCTTCCGATTTCGAGGATAATCGGCAGCTTTTGAAGCAATTCTGTGAAAATCACTTGAAAGACGAACACCAGAACGTCGTTCTCGTCACATCGGGAGGCACAATCGCGCCGCTGGAGCACAACACCGTTCGATTCGTTGACAACTTCAGCGCTGGAAGTCGCGGCTCCTCATCGGCCGAATACTTCCTCGATCAGGGATATGCCGTCATATTCTTGTTCCGCACAAAGTCGCTCGAGCCGTTCACGCGACACTTCAGTGGCCAACAATTTCTCGACATGCTCGAGATCAACGACCGCGAGCACGTCGACAGTCCGAGCATCCACGTTAAGCCGGACTCGGTGGACGTGCTGTTGCCAATTTTACGAAAGTATAAGCAAGCTCAAGAGAGCAACCGACTGCTCTACATTAACTTTACAAGCGTAAGCGACTATTTGTGGCTGTTGCGAGCGGCGTGCGAGGCTCTGGCACCGTTCGAGAAGCGTGCCATGCTCTATCTCGCCGCGGCCGTCTCCGACTTTTATGTTCCTCAAGAAGACATGCCAAAACACAAGATTCAATCGAGTGGTGCTCCGAAGATATCATTGCAGCTAGTTCCGAAAATTTTGAAGCCGCTGGTGTCGAGTTGGGTGCCGCAGGCTTACGTAGTATCCTTCAAGCTGGAGACTGACGACTCTTTGCTCATCGCCAAATCGCGCGAATCGCTGATGAAGTATAACCACAAGCTCGTGATTGCAAACGTTCTGCAAACGAGACGAAACCGGGTGGTCTTTGTGACACCGACCGCGTCGGAGGAGATTTTGTTGTCGAAGGAGCAGGCTCACTCGGGTCTCGAGATCGAAGAGCCGATTGTGTGCGAAGTGATCAAACGACACGAGGAGTTTCAAGCGGCCGTGGAGCAA
Protein: 313 (aa)
MGSWEEFYANHLPPSDFEDNRQLLKQFCENHLKDEHQNVVLVTSGGTIAPLEHNTVRFVDNFSAGSRGSSSAEYFLDQGYAVIFLFRTKSLEPFTRHFSGQQFLDMLEINDREHVDSPSIHVKPDSVDVLLPILRKYKQAQESNRLLYINFTSVSDYLWLLRAACEALAPFEKRAMLYLAAAVSDFYVPQEDMPKHKIQSSGAPKISLQLVPKILKPLVSSWVPQAYVVSFKLETDDSLLIAKSRESLMKYNHKLVIANVLQTRRNRVVFVTPTASEEILLSKEQAHSGLEIEEPIVCEVIKRHEEFQAAVEQ
| Type | Start | End | Length |
| CDS |
53494 |
54296 |
803 |
| CDS |
54366 |
54501 |
136 |
| intron |
54297 |
54365 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001847338 |
cornichon [Culex quinquefasciatus] gb|EDS25999.1| cornichon [Culex quinquefasciatus] |
1e-131 |
| InterPro |
IPR007085 |
DNA/pantothenate metabolism flavoprotein, C-terminal |
|
| Pfam |
PF04127.10 |
DNA / pantothenate metabolism flavoprotein |
3.6e-19 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000028636 |
| N. vitripennis |
NV14281-PA |
| C. quinquefasciatus |
CPIJ005389 |
| B. mori |
BGIBMGA013587-TA |
| H. melpomene |
HMEL012916-PA |
| D. melanogaster |
FBgn0261285 |
| H. sapiens |
ENSP00000361642 |
| D. plexippus |
DPOGS210635PA |
| T. castaneum |
TC004384 |
| H. sapiens |
ENSP00000361641 |
| A. mellifera |
GB14583-PA |
| A. gambiae |
AGAP004311 |
| P. vanderplanki |
Pv.12260 |
| P. humanus |
PHUM259630-PA |
| A. aegypti |
AAEL014176 |
| S. invicta |
SI2.2.0_09489 |