MidgeBase gene description page [Pn.04446]
Outline
| Gene ID | Pn.04446 |
| Type | Protein coding gene |
| Scaffold | PnScaf3705 |
| Start | 451 |
| End | 2429 |
| Direction | - |
Sequence
Transcript: 1182 (bp)
ATGTTACTAAACTCATATGTATTTAACTTTCTTAAACGAGAATTGGAGCACGATATTCAGAAGTCATTGTTAGTGTTTTGCTCGGTACTGATTGTGGTTTTCATTCTGCAATGTGTCGTGAAGCAGCTCTTGGAAATAACCAAACTCCCGCCCGGTCCCATCGGAGTGTGGCCGTTCGGAATTTTAAAGTTTATCGGCCACGAGAAGCACAAGTCGCTGATGAAATTGGCAGCGACCTACGGGCCACTGTTTAGCTGCAAATTGGGCCAGCAATTGTATGTTGTGATAAGTGATTACAAATTGATTCGAGAGATTTTCAAAAAAGAGTCAATGACGGGAAGGCCGAAAACTCCGCTCTATGGAGGTGTGATAAATGCAGAAGGTGCCCTGTGGAAGTCCGAGAGGCGCTTCTTGCACGAGAAACTCAGACGCTTTGGAATGACGCATTTCAGCCATAAAAACAATAAATTGCACGAAATTATAAACAATGAAATCAGCGAGCTTTTGGCAACGCTGAAGCAAGAGACAAAGAAGCCGTTCGACCTGGAGCCTCACTTTGCCGTATCAATTAGCAACGTTGTATGCAATTTGCTGATGTCTGTTCGTTTCACACGAAATGATCCGAAATTCATCAGATTTAATTGCATGATTGAGGAGGGCATGCGACTTTTCGGAAAGATCACCTCCGTCGATTACATACCAATTACTCAATATTTTCCATCGTTCCAAACGGCCAAAAGCCAAATCGCCAGCAATCGCAAAGAGATGTTCGAGTTTTACCGCGAGGTCATCGAAGAGCACCGAAGAACGTTCGACCGCAACAACATTCGCGACCTGGTCGACTTCTACCTGCTCGAGATCGAGCAGGCAAAGGAGAACGGCACCGAGCACGAGCTCTTCGACGGCCGCAACCACGACGAGCAGATCATGCAAGTGATGGGCGATCTCTTCTCCGCGGGCATGGAGACCATCAAGACGACGCTGCTGTGGCTCATCGTCTTCATGTTGCGCAATCCCAATGCCAAAAAGCAAGTTCAAGACGAACTCGACAGTGTCATCGGACGCCAGCGCATGCCAAAGTTCCAGGACTTGCAGTATCTGCCCAATACCGAGAGCACAATCTACGAGGTGCTCCGAATCAGCTCGATCGTGCCGCTCGCGACAACACACTCGCCTATGATG
Protein: 394 (aa)
MLLNSYVFNFLKRELEHDIQKSLLVFCSVLIVVFILQCVVKQLLEITKLPPGPIGVWPFGILKFIGHEKHKSLMKLAATYGPLFSCKLGQQLYVVISDYKLIREIFKKESMTGRPKTPLYGGVINAEGALWKSERRFLHEKLRRFGMTHFSHKNNKLHEIINNEISELLATLKQETKKPFDLEPHFAVSISNVVCNLLMSVRFTRNDPKFIRFNCMIEEGMRLFGKITSVDYIPITQYFPSFQTAKSQIASNRKEMFEFYREVIEEHRRTFDRNNIRDLVDFYLLEIEQAKENGTEHELFDGRNHDEQIMQVMGDLFSAGMETIKTTLLWLIVFMLRNPNAKKQVQDELDSVIGRQRMPKFQDLQYLPNTESTIYEVLRISSIVPLATTHSPMM
| Type | Start | End | Length |
| CDS |
454 |
1149 |
696 |
| CDS |
1286 |
1407 |
122 |
| CDS |
2066 |
2429 |
364 |
| intron |
1150 |
1285 |
136 |
| intron |
1408 |
2065 |
658 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001649970 |
cytochrome P450 [Aedes aegypti] gb|EAT43716.1| cytochrome P450 [Aedes aegypti] |
1e-132 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF01424.17 |
R3H domain |
0.067 |
| Pfam |
PF09973.4 |
Predicted membrane protein (DUF2208) |
0.052 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
3.2e-63 |
| Pfam |
PF07125.6 |
Protein of unknown function (DUF1378) |
0.19 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC001947 |
| H. melpomene |
HMEL005066-PA |
| D. plexippus |
DPOGS213007PA |
| A. mellifera |
GB14343-PA |
| H. sapiens |
ENSP00000333212 |
| C. quinquefasciatus |
CPIJ801469 |
| M. musculus |
ENSMUSG00000027983 |
| P. vanderplanki |
Pv.07373 |
| H. sapiens |
ENSP00000423667 |
| D. melanogaster |
FBgn0010383 |
| N. vitripennis |
NV19010-PA |
| P. humanus |
PHUM319540-PA |
| A. aegypti |
AAEL004870 |
| B. mori |
BGIBMGA006916-TA |
| S. invicta |
SI2.2.0_13749 |