MidgeBase gene description page [Pn.04385]
Outline
| Gene ID | Pn.04385 |
| Type | Protein coding gene |
| Scaffold | PnScaf3626 |
| Start | 15346 |
| End | 18786 |
| Direction | - |
Sequence
Transcript: 3054 (bp)
ATGAGTCGCTATCCAGAGCAGCATTCGCCGACTCCTCGCAAGCCTCCGCGTGGAAAATACACCAGGGATACGTATTCCACATCATCGAGTAATCTTTTAATGTCCGTGATAAAGACTCTGGACGCGAGCGAAAACAATGAGGAGCGTGAGCGAGAAAAGTTGAAAATCGAAAAGGAGTTTAAGAAATCCGACAAAAGATTGGCTGAACTCGTTGGTGCTCACGATTCAGAACTGACAAAGACTATGCAATTATTTTCAAAAATATCGACCGAAGTTGATTTTTCACGAGAAAAAGTTCGAACGGTGAGAGAGAACTTGCAGGCTTGTAAGCAGCTGCTGAGATGCAGAAGAGAGGAGTTGAAGAAGCTCTACACAGACGCTGTGAAGAATAGGCATGTAATGCAATATTTGGATCACATAAATGAGCTTCGGAATGTCAATTCAACAAAATTTGGCGTTAGTCTTCAGCGGAGGCACTACTTGAAAGCAACTAAGATGCTCATGAATGCAATAGAAATATCAGAAAATCAATTGAAAGGCGTCGAGGGTCTCGAAGACCTGCGTCAGGATTTTGAGAACAAAAAGGCTCATCTGTATACGAAGCTCGTGGAGGAAATGAGCAAGCACATTTATCATTCCAGCACGACGGAAGTGCTCTCCAATTTTCAACGCAACAACTCTGCTCGCGTCAGTTCGAATCAAATTCAAGCGCCATTCCAACGTAATACCATAAGGAAGTCAGCGGATCGCATCGAAGCCAACAACAAGGCGAAAAAGGCTCTGCAAGAAATCACCCAAAACGGCTATGTTGATCGCGATTTGGAGATAATCGATGACATATCGCTTCTCGATCCCGAAATCAACTCCACATACTTCATCGGTATAATTGTTGAATGTTTCGCTTTGTTACAAAAAGTGCCTGATTCTGTTGAGACGATGAAAATTCAGATGCAGCACGAGCTGCTGGCGATTGTCGAGAAGACGACTGCGTACATTCTCGATCTTCGACATCGCCAGGGCGGCGGTGGCGGCGGAGGAGGTGGAGGTGGTGGTGGCAGTGGACCGAAATCATTGCTTGAAAACAGTGAAAGTGGCTTATTCGATGTTCCTTTTCTAGAGTTACTTGATTTGCTGTTTAGACAATTTCAATTGATTGCCGAAGCTCATCAGCTGACACTAAAGAATTACAGCAATGTAATCAAGCGCTACCAGATGAGCGTAAAGTCCTACGATTTAACTGACTTTTGGGGACAAGTGCAAGCAGTGCTGCAGTTGCTGTTGACTGATTATTTAGACATTCAAAACACGGGCGACGACGAGCTGAAGGCCTACTTTCCCGAGCAGCAAGTCAATATTAACACATACTTCGGTCGACGCAAGAACGTTTCGAAGAAGACGCTCTTTCGCTTCGACAAATCCTCGCACACGACAGACGTAGTGAGCTCCAACACACTCGACGTCGAGCGGCGTGGACATCTGAGAAATTTGTCCAACGTCTCGTCGTCATCTGCAAAGGAAATCATCACGTCGATAAGCAGTAAGAAGAGGCGAGAAAAGCTCTTTGTGTGCAAGCCAGATCCGTCGCTGATAAGAAAAATCTTCATTCCGATGTTGGCATACATTCACACAATCGAGAGCAGCGCAAACATGAAGAAGAATGGCCAAGTGTCGAGTTTGCATGACTTCCTAACGACATATGTAAAGGAGTCTTATCTCTCGCGTGGACACAATCGAAATCTGTCGATGACAATTGAGTCGCTCTCGAAGTCGCAAGACGCTTGGAAGGCAATAATTAGTGCGGAGGAAATGAAGAAGCTCGGGCTCAGCAGGCCTCTGCTGCAGTCGTGTCGCATCGTTGAAAATTTAATTGCGGAAACGAAGCAACTGATTCAAGATTTGCCATTATACCACGAGGATTTGCTGAAGAATGTGTGCGCTCTTCTCAACACTTATCGCGAGACGTGTCAGGCAGCATATCGTGGCATCGTTCAGCCCGACACCGAGGACAAGAGAATTTACTCGGTGGCGTGGCTGAAGGACGAGGACATCAGTCGATTTCTCAAAACGTTACCAAACTATCTCGATCTAAAGACGGCCAATGCGAAGGCAAAGCGCGGGAAACTCAAAACTGAAATGTCCGAAGACGACAGTCCGACACAGATTCAGCAGCGCAACATTCGCGAGGCTGAGATGCTGACGAGCAACTTGGGCGACGGTGGCATATCACAGCACGAGATTCTAAGCGACATCGGTGTGCTGAAGGAGCTTGCAATTCTGCAGGAGAGCATGGAATGGTTTGCATATCGCATCAACGAGTTCGCCAATGATTTGCGAAGACCCATCACGTGCGCTGCGAAGAATGCAAATGTCGCTACGCTTCCCGCTGAACTCACACAGCCGATTGTCATTCGAGACGGTACAATAAAGGTGCTAACCAATTTGGCGTTGGGCTTCGATGAATTGGCCAACACGTGCTTGCTTGTGCTTCATTTAGAGGTTCGCGTGCAGTGCTTTCACTATTTACGGTCGAATTCATCGGACAAATTCAAGGACAATAATCCTAATAAGAATGATACTCTTGAGCCTGATACCAAAGTACTGAAACTCACTAAAGTCTTATCAGACCTCGACGAGGCATTTTCATCGACACTTCATCCACGCAAGACGAAGTACATTTTCGAGGGCTTAGCTCATCTCGTCGCAAGAATACTCATCATGACGTCAAACTCGATGGAAGCGCTGGATAATCATTCGATTCAACAGATGATTAGAAACAGTTTGGCGCTGCAACAAACACTCAGTTCAATTACTGCCCAACGTGAACAATTTCTTGATCATGCGAGAAACTACTATGAGATGCTTTATAAGGAGCCGGAGGACATTCTAAAAGACATTGCCGAGAAGGGAGCGAAGTACACCGAGCTTCAATATCTGCAAGCCTTCAAGCTCATCTGTCAAGGCCGAGTGAACGAGAATGGAGAAAATTTGCTGACAATTTATCAGCAAAAGCTTAACCATATTTTAGGAACAAAGCAACCCGTCGGTATTCAAGTT
Protein: 1018 (aa)
MSRYPEQHSPTPRKPPRGKYTRDTYSTSSSNLLMSVIKTLDASENNEEREREKLKIEKEFKKSDKRLAELVGAHDSELTKTMQLFSKISTEVDFSREKVRTVRENLQACKQLLRCRREELKKLYTDAVKNRHVMQYLDHINELRNVNSTKFGVSLQRRHYLKATKMLMNAIEISENQLKGVEGLEDLRQDFENKKAHLYTKLVEEMSKHIYHSSTTEVLSNFQRNNSARVSSNQIQAPFQRNTIRKSADRIEANNKAKKALQEITQNGYVDRDLEIIDDISLLDPEINSTYFIGIIVECFALLQKVPDSVETMKIQMQHELLAIVEKTTAYILDLRHRQGGGGGGGGGGGGGSGPKSLLENSESGLFDVPFLELLDLLFRQFQLIAEAHQLTLKNYSNVIKRYQMSVKSYDLTDFWGQVQAVLQLLLTDYLDIQNTGDDELKAYFPEQQVNINTYFGRRKNVSKKTLFRFDKSSHTTDVVSSNTLDVERRGHLRNLSNVSSSSAKEIITSISSKKRREKLFVCKPDPSLIRKIFIPMLAYIHTIESSANMKKNGQVSSLHDFLTTYVKESYLSRGHNRNLSMTIESLSKSQDAWKAIISAEEMKKLGLSRPLLQSCRIVENLIAETKQLIQDLPLYHEDLLKNVCALLNTYRETCQAAYRGIVQPDTEDKRIYSVAWLKDEDISRFLKTLPNYLDLKTANAKAKRGKLKTEMSEDDSPTQIQQRNIREAEMLTSNLGDGGISQHEILSDIGVLKELAILQESMEWFAYRINEFANDLRRPITCAAKNANVATLPAELTQPIVIRDGTIKVLTNLALGFDELANTCLLVLHLEVRVQCFHYLRSNSSDKFKDNNPNKNDTLEPDTKVLKLTKVLSDLDEAFSSTLHPRKTKYIFEGLAHLVARILIMTSNSMEALDNHSIQQMIRNSLALQQTLSSITAQREQFLDHARNYYEMLYKEPEDILKDIAEKGAKYTELQYLQAFKLICQGRVNENGENLLTIYQQKLNHILGTKQPVGIQV
| Type | Start | End | Length |
| CDS |
15349 |
15474 |
126 |
| CDS |
15538 |
15795 |
258 |
| CDS |
15856 |
16029 |
174 |
| CDS |
16089 |
18087 |
1999 |
| CDS |
18146 |
18402 |
257 |
| CDS |
18466 |
18633 |
168 |
| CDS |
18715 |
18786 |
72 |
| intron |
15475 |
15537 |
63 |
| intron |
15796 |
15855 |
60 |
| intron |
16030 |
16088 |
59 |
| intron |
18088 |
18145 |
58 |
| intron |
18403 |
18465 |
63 |
| intron |
18634 |
18714 |
81 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_321399 |
AGAP001694-PA [Anopheles gambiae str. PEST] gb|EAA00822.5| AGAP001694-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR007191 |
Sec8 exocyst complex component specific domain |
|
| Gene Ontology(BP) |
GO:0006904 |
vesicle docking involved in exocytosis |
|
| Gene Ontology(BP) |
GO:0015031 |
protein transport |
|
| Gene Ontology(CC) |
GO:0000145 |
exocyst |
|
| Pfam |
PF04048.9 |
Sec8 exocyst complex component specific domain |
3.2e-22 |
| Pfam |
PF07928.7 |
Vps54-like protein |
1.5 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000444224 |
| P. humanus |
PHUM515580-PA |
| A. aegypti |
AAEL006185 |
| A. gambiae |
AGAP001694 |
| H. melpomene |
HMEL002100-PA |
| H. melpomene |
HMEL017613-PA |
| D. melanogaster |
FBgn0262603 |
| H. sapiens |
ENSP00000376868 |
| B. mori |
BGIBMGA010951-TA |
| C. quinquefasciatus |
CPIJ001354 |
| H. sapiens |
ENSP00000437901 |
| A. mellifera |
GB18169-PA |
| N. vitripennis |
NV10567-PA |
| T. castaneum |
TC004382 |
| H. sapiens |
ENSP00000444557 |
| H. sapiens |
ENSP00000253861 |
| D. plexippus |
DPOGS211384PA |
| M. musculus |
ENSMUSG00000029763 |
| P. vanderplanki |
Pv.00687 |