MidgeBase gene description page [Pn.04378]
Outline
| Gene ID | Pn.04378 |
| Type | Protein coding gene |
| Scaffold | PnScaf3612 |
| Start | 3225 |
| End | 5558 |
| Direction | - |
Sequence
Transcript: 1119 (bp)
ATGAGGAGATTTTTGGTGATTTGTTTGATCGTTTGTTGCGGCTTTTTTGAGCGGTCGCTTTCGATCGCCGACAGGGTTGGATGCCGCGACGAGGATGGAAATTTGGTCGACTGGTTCTACCTCTACAAGCTGCCCAACAAGTACTCGAACACGGTGAACTCGGGCCTCGAGTATCTCTACCTCACGCCCGACTCCTCGAGCTCGTGGACGAAGTCGTCGCTGCTCATCGACTCGGTCGACAGCATGCCGGGCCGCACGCTCTCGGTCGTCTACAACGAGTCGCGCAGTGACGAGCTGCTGGTGGCGATGTACAACGACGAGCCGACGAATGCGAAGGTCGACACGGTGCGCGGCCACACGAAGGGCGTCCTTGCGGCCAACGACATCAGCGGCTTCTGGCTGGTTCATTCCGTGCCCAAATACCCGCCTGCAGTCGACGAGGGCGGCTACGGCTACCCGCACAGCGGCACCATCTACGGGCAGAGCTTCCTCTGCGTCAGCTTCACCGGCGACCAAATCGGCAGCGTCGGCAAGCAGCTGCAGTTCAACGAGCCGCGCTTCTACTCCTCGCGCGTTCCCTCCTACCTCGAAACCATCTACCCGCAGGTGGTGGAGGCGCTGAAAATGGAAGAAATGACGTCGCCGCCGTTCTACCGTCTCGCCACACTCAAGTCCCGCTTCGGAGCGACCTTCACGTCGTTCGCGAAGTCGGGCGCGTTCAGCAAGGAGCTGTACGAGGACCTGGTGGCGCCGCACTTCAATCCCGGCGCGTTCTACGTCGAGTCGTGGCAGCACGGCAAGGGCAACCTCGACAGCGACTGCTCGCGCCCCACCAAGGTCTACAACGTCCGCGACGTCGCGATTAGCGCGCAGCACGCGATCGAGTTCTCGACGCTGCACGACCACTCCAAGTGGCTGGTGAGCGAGGAGAACGAGCTGGTGTGCGTGGGCGACATCAACCGGCAGGAGCACCAGAAGGTGCGCGGCGGCGGCACCGTTTGTGTGCAGCTCGCGGGACTCGCGAAGGTCTACGCCGCGAGCGTGCGGGACGCGGTGCCGTGCGAGAAAAAAGGCGCCAAAAAGTGGTCGCTCATTTTCGGGTACAAGAAGGTCTTCGTT
Protein: 373 (aa)
MRRFLVICLIVCCGFFERSLSIADRVGCRDEDGNLVDWFYLYKLPNKYSNTVNSGLEYLYLTPDSSSSWTKSSLLIDSVDSMPGRTLSVVYNESRSDELLVAMYNDEPTNAKVDTVRGHTKGVLAANDISGFWLVHSVPKYPPAVDEGGYGYPHSGTIYGQSFLCVSFTGDQIGSVGKQLQFNEPRFYSSRVPSYLETIYPQVVEALKMEEMTSPPFYRLATLKSRFGATFTSFAKSGAFSKELYEDLVAPHFNPGAFYVESWQHGKGNLDSDCSRPTKVYNVRDVAISAQHAIEFSTLHDHSKWLVSEENELVCVGDINRQEHQKVRGGGTVCVQLAGLAKVYAASVRDAVPCEKKGAKKWSLIFGYKKVFV
| Type | Start | End | Length |
| CDS |
3228 |
3753 |
526 |
| CDS |
4340 |
4819 |
480 |
| CDS |
5446 |
5558 |
113 |
| intron |
3754 |
4339 |
586 |
| intron |
4820 |
5445 |
626 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001656030 |
deoxyribonuclease ii [Aedes aegypti] gb|EAT35413.1| deoxyribonuclease ii [Aedes aegypti] |
4e-86 |
| InterPro |
IPR004947 |
Deoxyribonuclease II |
|
| Gene Ontology(BP) |
GO:0006259 |
DNA metabolic process |
|
| Gene Ontology(MF) |
GO:0004531 |
deoxyribonuclease II activity |
|
| Pfam |
PF03265.10 |
Deoxyribonuclease II |
1.4e-95 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA008338-TA |
| D. melanogaster |
FBgn0000477 |
| H. sapiens |
ENSP00000222219 |
| C. quinquefasciatus |
CPIJ015966 |
| M. musculus |
ENSMUSG00000003812 |
| M. musculus |
ENSMUSG00000028185 |
| A. mellifera |
GB14548-PA |
| H. sapiens |
ENSP00000359699 |
| N. vitripennis |
NV11825-PA |
| P. humanus |
PHUM105720-PA |
| P. vanderplanki |
Pv.06816 |
| A. gambiae |
AGAP003295 |
| H. melpomene |
HMEL011152-PA |
| H. sapiens |
ENSP00000359696 |
| H. sapiens |
ENSP00000466912 |
| T. castaneum |
TC030546 |
| A. aegypti |
AAEL012418 |
| D. plexippus |
DPOGS206636PA |
| H. sapiens |
ENSP00000445988 |