MidgeBase gene description page [Pn.04246]
Outline
| Gene ID | Pn.04246 |
| Type | Protein coding gene |
| Scaffold | PnScaf3476 |
| Start | 23125 |
| End | 23631 |
| Direction | + |
Sequence
Transcript: 504 (bp)
ATGACGAAGGGATACGCAAAGTCACTCTCGAACACATCGACCACCTCAATTGACTCCGGCATTTTCGACATTGACATTTCCTCGTGCGATAAGGCGACTTCAAAGGAAATGAGCATCGGCGAGGCCGTCCGCAAGATCTTGACGGATGCGGCGCAAGACAAGCGCGTCGTCTCGGGAGTAAAGAACTCGATCAAATTCCTCAACGAGACGGAAAACCCCGACAGCGCGCTCTTCTTCTTCATGGCGCCGACCGTCGATCACACCGAGCACATGAGCGCGATTTTGCTGAAGGCCTTCTGCTTCGAGAACGACATCTACATCGTGCAGCTGGACAGCATGGAGAAGCTCAGTCGCATCCTGAATGTGGAGGGCACGAGCTGCGCTCTGGTGCAGCGCACCGACTTCGAAAACGACCTCTACACCAACGACGAAACCGTCCTCATCGATCACTGCGAGGACTTCTGGGATGAGGTCGTTCAGCCCATCATTCGGCTGCCCGAAAAG
Protein: 168 (aa)
MTKGYAKSLSNTSTTSIDSGIFDIDISSCDKATSKEMSIGEAVRKILTDAAQDKRVVSGVKNSIKFLNETENPDSALFFFMAPTVDHTEHMSAILLKAFCFENDIYIVQLDSMEKLSRILNVEGTSCALVQRTDFENDLYTNDETVLIDHCEDFWDEVVQPIIRLPEK
| Type | Start | End | Length |
| CDS |
23125 |
23628 |
504 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001652309 |
hypothetical protein AaeL_AAEL006886 [Aedes aegypti] gb|EAT41477.1| conserved hypothetical protein [Aedes aegypti] |
1e-29 |
| InterPro |
IPR024824 |
Growth arrest and DNA damage-inducible protein GADD45 |
|
| InterPro |
IPR004038 |
Ribosomal protein L7Ae/L30e/S12e/Gadd45 |
|
| Gene Ontology(BP) |
GO:0006950 |
response to stress |
|
| Gene Ontology(BP) |
GO:0051726 |
regulation of cell cycle |
|
| Gene Ontology(CC) |
GO:0005634 |
nucleus |
|
| Pfam |
PF01248.21 |
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
2.8e-09 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL013651-PA |
| C. quinquefasciatus |
CPIJ012801 |
| D. melanogaster |
FBgn0033153 |
| A. aegypti |
AAEL006886 |
| A. gambiae |
AGAP007650 |
| P. vanderplanki |
Pv.16880 |
| A. aegypti |
AAEL006883 |
| H. sapiens |
ENSP00000364924 |
| B. mori |
BGIBMGA013938-TA |
| P. vanderplanki |
Pv.16881 |
| T. castaneum |
TC008827 |
| A. gambiae |
AGAP007651 |
| D. plexippus |
DPOGS206513PA |