MidgeBase gene description page [Pn.04223]
Outline
| Gene ID | Pn.04223 |
| Type | Protein coding gene |
| Scaffold | PnScaf3460 |
| Start | 45230 |
| End | 45848 |
| Direction | - |
Sequence
Transcript: 495 (bp)
ATGTCATTTGAAAATTGCAATAAAACAAAAGTATTGTTCGTATGCTTCGGCAATACGTGTCGGTCGCCGATGGCTGAGGCAATTTTCAGTGACCTTGTGCGTAAAAGGAATTTGCAGGAAGACTTTTTCATCGACTCCGCTGCACTGAGCGACTGGCAATGCGGAAGCGGCATAAATGAGAAAGTTGAAATCATTTTGGAGAGAATTGGAATAAAGGACTTCACGCACGTGGCTCGACAAATTTCCTACAAGGACTTTCAAAATTTCGATTTCATACTCGGGATGGACTACTTTCACATCGAGGAACTCACAGCGGCTGCAGATGCACTCAAAAGCAACGCAAAAGTATTCCTGCTAGGAGCATTCAATCCAGACAAAAGCGAGCTCATAATAAGGGATCCAATTTGCAGTTCAATGAGCAAATTCGAGAAATGCTACGACCAAATTTCTGCAAGTTGCAACGTTTTCCTAGAGAAAATTCTTGACAAGTCAGTT
Protein: 165 (aa)
MSFENCNKTKVLFVCFGNTCRSPMAEAIFSDLVRKRNLQEDFFIDSAALSDWQCGSGINEKVEIILERIGIKDFTHVARQISYKDFQNFDFILGMDYFHIEELTAAADALKSNAKVFLLGAFNPDKSELIIRDPICSSMSKFEKCYDQISASCNVFLEKILDKSV
| Type | Start | End | Length |
| CDS |
45233 |
45579 |
347 |
| CDS |
45643 |
45728 |
86 |
| CDS |
45787 |
45848 |
62 |
| intron |
45580 |
45642 |
63 |
| intron |
45729 |
45786 |
58 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001603437 |
PREDICTED: low molecular weight phosphotyrosine protein phosphatase-like [Nasonia vitripennis] |
2e-31 |
| InterPro |
IPR000106 |
Protein-tyrosine phosphatase/arsenate reductase |
|
| InterPro |
IPR002115 |
Protein-tyrosine phosphatase, low molecular weight, mammalian |
|
| InterPro |
IPR023485 |
Phosphotyrosine protein phosphatase I superfamily |
|
| InterPro |
IPR017867 |
Protein-tyrosine phosphatase, low molecular weight |
|
| Gene Ontology(BP) |
GO:0006470 |
protein dephosphorylation |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0004726 |
non-membrane spanning protein tyrosine phosphatase activity |
|
| Gene Ontology(MF) |
GO:0003993 |
acid phosphatase activity |
|
| Gene Ontology(MF) |
GO:0004725 |
protein tyrosine phosphatase activity |
|
| Pfam |
PF01451.16 |
Low molecular weight phosphotyrosine protein phosphatase |
1.8e-34 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.05513 |