MidgeBase gene description page [Pn.04199]
Outline
| Gene ID | Pn.04199 |
| Type | Protein coding gene |
| Scaffold | PnScaf3455 |
| Start | 54102 |
| End | 60660 |
| Direction | + |
Sequence
Transcript: 4278 (bp)
ATGTTTGATTATCCGCCAAAGTGTCCAGGCATATTGACGTCAAAGCTTACGAGCATCTTCGGATGGCGGCACACGTACCGCGTTCACGATCGTCAAAAGGGACTCAATCACTTTAATGGCCATGCGTCTAATGAAAATGTCCACAATATCCACAAATCGTACTCACTGAACTTACCACCAAAGAAGCACCGCAAGATCACCGCGTCCAATCCGTCTCTACCCGAGGCTTCATCATCGTCGTCAGGGGCCGCGGCAGCAACGAATCCCGAGTCATGGGTCGTCGTGCACCACCTTCAATCGCAGTCGGGCATTCTCGACCCCGACGATCGAGTCAACGATGTGGCCGATGACCGAGAGCAAATCCTCGCCAGCTACGACGACCACCCGGGTCCGGATCCGTGCATTCCACAGGGTGGCGGAGATGGAGCGAGCGGCAGCAGCGTCGGCACCGGCAGTCCCGACATCTTCCGCCTCCAAGACGGAAAATACACGGCGAACCACCATCAGAGCGAAAGCATTCCGACACACATCGACGTGACGGAGAATGATCAGCCGCCGGTGGGGCTGACGCTGCAAGTGAGGCGAGGCAGCGAGCCGTCGCTGCTCGCGCTCGATCAGAACTCTCAGCTGTATCCGAGTGAGAATTCTCAGGAGCCGTCGAAGCGATGGTCGGCGGCGCCGGTGTGCCGCGACGAGCCGGACCGACTGCTCAGCGGTTCGGTCACAAACGGAGCTTTCTCCTCACCAAAGTGGTCAGTGCCAGAAGAAGAAATTTCAAACGAAACGATGCCATCAACTTTCACACGCTCCGGACGACTGTCGATGCAGTTTTTAGGCGATGGAGCAAACTACCGCTGGATTGAAGCCGCCGAGAAAGCAGCGCACAATCACAGCAGAAGCGATAGCAGCAGTCAAAATGAGAGTGTGACCAACAGCAACAGCAACAACAATTCCTTCAACTCGAAGTCGCTTCCGCGCGACGCCAAGCAGCGCAAGGAGCCGCTCGGCCAAGCAAATGTGTCATCCTACGAGTCCATCCGACAGAAGAACGGCGAAATGCTTCTCGTGACGAACGAGTCTGGAGGCCAATTGGGCCTGACAGCGATTCCAGACCGCGAGAACGGTGGACTTCTCGTTCAATCGGTTGAACCGGATAGTCGTGCCGAAAAGGGAAGGTTGAGGCGTGGCGACCGAATTCTCGAGATTAACGGCGTCAATCTGATGGAGCTGTCTGAGGCCTCCGTGCAAGACCAGCTGAAGAAGTGCATCGCCTCGTCGGAGCTCCGACTGCGTGTAATTCGAGCGCAAAAGTCGGAAACGCGAGATCGCAGCAAGATCGAGATGTTCGAGGCGGAGGAGAAAGCGGCCTCGGCTCACAGCAAAGTCGCTCACGTTTCGCCGACGAGGAAGCCGGGATCGATTGCAACGAGCTCGTTGCAGGCGGCCAACACAAGAAAGCTCGGACGGAAGATCGAGATTACGCTGAAGAAGGGCGCGCATGGCTTAGGTTTCAGCGTGACCACGCGAGACAATCCCGCCGGCGGCCATTGCCCGATTTACATCAAGAACATTCTGCCGAAGGGAGCTGCGATCGAGGACGGCCGATTGAAGCCCGGCGACCGTCTCCTGGAGGTCGACAACCTTCCGATGACGGGCAAGTCGCAGTCAGAGGTCGTCAATATTCTGCGAGCGACTCAGCCCGGTGCGACGGTGCGAATCGTCGTGTCGCGACAGCAAGAGATTCCCGAGGTTGACGAGCGAGAAATCGGTGGCGGAGGCGCCGAATTGGTGGAGCAGCAACTGCAACAGAGGAGCACCACACTTCCCAAGCAGCCACCGCCGCCGATTCTACCCAAAAACGTCCTCAAATCGCCATCGGCTCCAAACATCAGCGAGGTCCTCGACGGCAAGTCAAACTCCATCGACAACCTCAACGACGTGAAGATGAAAATCAAGAAATTCAACACGTCCTCGCCGAACACTTCGAGAGACCAGAACGCAAACATCTTCCCCTGGCGCAACCGCGAAATTCTCACATTCCACATTCCGGTGCACGACACTGAGAAGGCGGGCCTTGGCGTGAGTGTGAAGGGCAAGACGGGCTCGGCCAATCCGAACACATCCAATCCAAAGCACGACGGTGACTTGGGCATTTTCATCAAGAGCGTCCTCCACGGCGGCGCCGCCAGTCGCGACGGTCGCCTCAAGATGAACGACCAGCTGCTGAGCGTGAACGGAATTACGCTGCTCGGACAGTCGAACGCCGTCGCGATGGACACGCTGAGGAGAGCGATGTTACAGACGGGCGGAAAGCATCCTGGCGTGATTGTGCTGAAAATCGCGCGACGCGCCTCATCGCGGCCCAGCAGCACCATCGAGAACGGAGACCTCCAGCACGTGGTCGACAGCAGCGGCAACACTAGCGAGCAGTCCGGCTCGACTGTCATCTACCTGTCGCCCAGCGACAAAAGCCAGCAGCAGCCGGAGCACAAAAGTCCAGTCACACCGGTGCAGGAGAACGGCAAGCGGTGGAGCAACCCGGTGCTCGACCGACTGACCGGCGGCAGCGGCAATTCGCGCGTTCCTTCGACTCTCATCCAAATGCCGCCCAGCCTGCGAAACGACAGCTACTACATGGCCACCAACGAGAACTGGAGTCCGAATGTTAATCTCAACAGCAGCAACGGCGTTCTCATCGAGGAGGACTCGGAGCCGACGTCGCCGCTGCCGTTGCTGCGACCGGAATATCACCACCAGATATCGGCATCTACGCCGACCAGCAACGGCGACACCACCTACGCGAGTCAGCTTTCGCTCGAGAACCCAGTTGATGCCTTCAGCCGCGACGCGATCGGACGCCGCAGCATGTCGGAGAAGCACCATGCGGCGCTCGACGCGAAAGAGACAGGAACGTACCAGCGAAACAAGAAGATCCGCGAGGAGCGCGAGAAGAGCCGGAATGGATCGAAGACGGCGTCGCAGCTTCACAGCTCGATCGAATCTCTCACGAACATGAATCGCATTGGCAGCATGAAGACGCGCCAGACGACGGACCTGCGCTCGGAGGCGATGGATAAAGTGACCGACTTGGGACCGTCGCTCGGCATGAAGAAGTCGTCAAGTCTCGAGTCGCTGCAGACGATGGTGCAGGAGATTCAGATGTCGGATGAGCCGCGCGGACCGAATGCTTTGAGAGCGCCGCGCGGTCGAGGACGCGAGGAGGTGCTTCGGGCGGCCGTCGAACGGCCCGAGTCTCAACCTCGCAAGCACTGGCTTCTCGAAGATGGAACAACGGGCGATAGCGATGGCGGCTTCATGAACCGCGGAACTCTCCAGTCGTCGACGAACGAGGGCAAGATGAAGGACCAGAAGAAGGGCTTCCTCAAGGGCATCGGCCACATGTTCCGCTTCGGAAAGCACCGAAAGGACGTGTACCCGGCCCAGACGGAGGTCATCACCGACTACAGTAGCTGGTCGAACGACGTCTCTGTGAAGAGCGCGACTCTCGGGCCATCTACTGTGACTTCGCCGTCGAGCAACTCCAATACTTCGCAGATGCATAGTCAACACAACCAATCGAATTCACACAACCATCAGAATCACAGTAGCAGCAGCAGCAACCACAACAACAACAGCAGTAATCATCACCATCAGCAGCCGCAACAACAGCAGCAGAGGGAGCCGAGCCACGAGAGACAATTGTCGGGAAATTCTTCCAACGGACCGCCATCCTATCACGCACCGCCGGCGATGATGAACGGACACGGTAGCAGTAAAATTACGCAAAATGACTTATTTAATCACAGATATTCGCACTACGTCAATTACGAGGAACTCCAAATGCAAATTAGTCGACGAAATCAGCACTATCACTCACAGCGCTCGGCGCGCAACGTTGATATGTCGCACTTTCATCCGTATAACGGCATGACACCAATCGCAAATGGCCATAAATATCCACCGCACCAAGCTCCGCAGCAACAGCAGCAGCAGCAGCCGCAGTCAATGCAGCAGCACCACCACATGCGACCGATATCCAGTTTCTACGAGTACGAGACGATTAATCCGAATGGACATTACAGGAAATTGGGCGAGCACTTCATCCCGCTCCAGAACAGCAGTAGCAGCAGCAAGATCATTAACGGAACGAGCTCGGTTCGCATCGCTGGCGCGCAGCAGAGAGGAGCCATTCCCGATATGAAGCAACATCGAGGGCCATTCATCACGCAGGTTCACATTCGTGATCAGAATGGCAAGCATCCGTCGGCATCAAAAGTC
Protein: 1426 (aa)
MFDYPPKCPGILTSKLTSIFGWRHTYRVHDRQKGLNHFNGHASNENVHNIHKSYSLNLPPKKHRKITASNPSLPEASSSSSGAAAATNPESWVVVHHLQSQSGILDPDDRVNDVADDREQILASYDDHPGPDPCIPQGGGDGASGSSVGTGSPDIFRLQDGKYTANHHQSESIPTHIDVTENDQPPVGLTLQVRRGSEPSLLALDQNSQLYPSENSQEPSKRWSAAPVCRDEPDRLLSGSVTNGAFSSPKWSVPEEEISNETMPSTFTRSGRLSMQFLGDGANYRWIEAAEKAAHNHSRSDSSSQNESVTNSNSNNNSFNSKSLPRDAKQRKEPLGQANVSSYESIRQKNGEMLLVTNESGGQLGLTAIPDRENGGLLVQSVEPDSRAEKGRLRRGDRILEINGVNLMELSEASVQDQLKKCIASSELRLRVIRAQKSETRDRSKIEMFEAEEKAASAHSKVAHVSPTRKPGSIATSSLQAANTRKLGRKIEITLKKGAHGLGFSVTTRDNPAGGHCPIYIKNILPKGAAIEDGRLKPGDRLLEVDNLPMTGKSQSEVVNILRATQPGATVRIVVSRQQEIPEVDEREIGGGGAELVEQQLQQRSTTLPKQPPPPILPKNVLKSPSAPNISEVLDGKSNSIDNLNDVKMKIKKFNTSSPNTSRDQNANIFPWRNREILTFHIPVHDTEKAGLGVSVKGKTGSANPNTSNPKHDGDLGIFIKSVLHGGAASRDGRLKMNDQLLSVNGITLLGQSNAVAMDTLRRAMLQTGGKHPGVIVLKIARRASSRPSSTIENGDLQHVVDSSGNTSEQSGSTVIYLSPSDKSQQQPEHKSPVTPVQENGKRWSNPVLDRLTGGSGNSRVPSTLIQMPPSLRNDSYYMATNENWSPNVNLNSSNGVLIEEDSEPTSPLPLLRPEYHHQISASTPTSNGDTTYASQLSLENPVDAFSRDAIGRRSMSEKHHAALDAKETGTYQRNKKIREEREKSRNGSKTASQLHSSIESLTNMNRIGSMKTRQTTDLRSEAMDKVTDLGPSLGMKKSSSLESLQTMVQEIQMSDEPRGPNALRAPRGRGREEVLRAAVERPESQPRKHWLLEDGTTGDSDGGFMNRGTLQSSTNEGKMKDQKKGFLKGIGHMFRFGKHRKDVYPAQTEVITDYSSWSNDVSVKSATLGPSTVTSPSSNSNTSQMHSQHNQSNSHNHQNHSSSSSNHNNNSSNHHHQQPQQQQQREPSHERQLSGNSSNGPPSYHAPPAMMNGHGSSKITQNDLFNHRYSHYVNYEELQMQISRRNQHYHSQRSARNVDMSHFHPYNGMTPIANGHKYPPHQAPQQQQQQQPQSMQQHHHMRPISSFYEYETINPNGHYRKLGEHFIPLQNSSSSSKIINGTSSVRIAGAQQRGAIPDMKQHRGPFITQVHIRDQNGKHPSASKV
| Type | Start | End | Length |
| CDS |
54102 |
54362 |
261 |
| CDS |
54824 |
55410 |
587 |
| CDS |
55677 |
55880 |
204 |
| CDS |
55942 |
58145 |
2204 |
| CDS |
58303 |
58897 |
595 |
| CDS |
60137 |
60515 |
379 |
| CDS |
60610 |
60657 |
48 |
| intron |
54363 |
54823 |
461 |
| intron |
55411 |
55676 |
266 |
| intron |
55881 |
55941 |
61 |
| intron |
58146 |
58302 |
157 |
| intron |
58898 |
60136 |
1239 |
| intron |
60516 |
60609 |
94 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001845381 |
partitioning defective 3 [Culex quinquefasciatus] gb|EDS40222.1| partitioning defective 3 [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR021922 |
Protein of unknown function DUF3534 |
|
| InterPro |
IPR001478 |
PDZ domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF12053.3 |
Domain of unknown function (DUF3534) |
5.1e-27 |
| Pfam |
PF13180.1 |
PDZ domain |
6.1e-24 |
| Pfam |
PF00595.19 |
PDZ domain (Also known as DHR or GLGF) |
1.3e-35 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000340280 |
| H. sapiens |
ENSP00000440857 |
| H. sapiens |
ENSP00000317261 |
| H. sapiens |
ENSP00000444429 |
| H. sapiens |
ENSP00000363920 |
| P. humanus |
PHUM257850-PA |
| H. sapiens |
ENSP00000363921 |
| P. vanderplanki |
Pv.17047 |
| H. sapiens |
ENSP00000363926 |
| A. gambiae |
AGAP000869 |
| T. castaneum |
TC012086 |
| C. quinquefasciatus |
CPIJ003808 |
| H. sapiens |
ENSP00000385848 |
| H. sapiens |
ENSP00000363908 |
| H. melpomene |
HMEL016161-PA |
| H. sapiens |
ENSP00000363905 |
| M. musculus |
ENSMUSG00000025812 |
| H. sapiens |
ENSP00000340591 |
| S. invicta |
SI2.2.0_07876 |
| D. plexippus |
DPOGS213816PA |
| B. mori |
BGIBMGA006557-TA |
| H. sapiens |
ENSP00000363922 |
| H. sapiens |
ENSP00000351618 |
| A. mellifera |
GB10346-PA |
| N. vitripennis |
NV12877-PA |
| H. sapiens |
ENSP00000341844 |
| A. aegypti |
AAEL007658 |
| D. melanogaster |
FBgn0000163 |
| H. sapiens |
ENSP00000311986 |
| H. sapiens |
ENSP00000443147 |