MidgeBase gene description page [Pn.04198]
Outline
| Gene ID | Pn.04198 |
| Type | Protein coding gene |
| Scaffold | PnScaf3455 |
| Start | 36272 |
| End | 38089 |
| Direction | + |
Sequence
Transcript: 282 (bp)
ATGAAAGTAACAGTTTGTTTTGGTGCCGTTCGCGTTGTTGTGCCATGTGGATCTGGAGAAATTTTGATTCGTGATCTCATTAGTGAATCAATTCGTCGCTACAAGAAAGCTACAGGAAAGAACTCAATAGGGGTTTTGGTTCACTTCTACTGTGCATGCACGTATACATTTCAAAATCCTCAAATTCGAATTGTCTCCGAGTCTGAGATTACGGCTGAAGCCATGATAGTTCGTTCGAACGACTGCCAAGTCAACGACATTCCACCAACGATAATAACAAAT
Protein: 94 (aa)
MKVTVCFGAVRVVVPCGSGEILIRDLISESIRRYKKATGKNSIGVLVHFYCACTYTFQNPQIRIVSESEITAEAMIVRSNDCQVNDIPPTIITN
| Type | Start | End | Length |
| CDS |
36272 |
36391 |
120 |
| CDS |
37925 |
38086 |
162 |
| intron |
36392 |
37924 |
1533 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_972548 |
PREDICTED: similar to partitioning defective 3, par-3 [Tribolium castaneum] |
1e-12 |
| InterPro |
IPR021922 |
Protein of unknown function DUF3534 |
|
| Pfam |
PF12053.3 |
Domain of unknown function (DUF3534) |
2.3e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA006556-TA |
| M. musculus |
ENSMUSG00000052062 |
| T. castaneum |
TC012085 |
| P. vanderplanki |
Pv.17048 |