MidgeBase gene description page [Pn.04164]
Outline
| Gene ID | Pn.04164 |
| Type | Protein coding gene |
| Scaffold | PnScaf3426 |
| Start | 49226 |
| End | 51263 |
| Direction | + |
Sequence
Transcript: 1560 (bp)
ATGAACAGCCACAGTGCAAAAACCGTCAACGGCATCGCGACCGAGAAGCTCCTCGACGGCCTCTCCATCGACGAGCTCTTCGAGCGTGGCGACGGACTCGCATACAATGACTTCCTCCTGCTGCCCGGCTACATCGACTTCACAGCCGACGAGGTCGATCTGTCATCGCCGCTCACGAAAAAGCTCACGCTGAAGGCACCGCTCGTGTCCTCACCGATGGACACCGTCACCGAGGCGGACATGGCGATTGCAATGGCCCTCTGCGGCGGCATCGGCATCATCCACCACAACTGCACGCCCGAGTACCAAGCGAACGAGGTGCTCAAAGTGAAGAAGTACAAGCACGGCTTCATTCGCGACCCGATGGTCATGTCACCGCACAACACGGTCGCCGATGTGCTCGAGGCGAAGCGCAAGAACGGCTTCACCGGCTACCCCATCACCGAGAACGGCAAGCTGGGCGGCAAGCTCGTCGGCATCGTGACGTCGCGCGACATCGACTTTCGCGAGAAGGACGTCGACCTGCGGCTCGAGGACGTGATGACGCGCCTCGACGACATGGTGACGGCGAAGCAGGGCATCAAGCTGCAGCAGGCCAACGAGATTCTCGAGAAGAGCAAGAAGGGCAAGCTGCCGATCATCAACCAGAATGGTGAGCTCGTGGCGCTGATTGCGCGCACCGACTTGAAGAAGGCCCGCAGCTACCCGAACGCCTCGAAGGACAGCAACAAGCAGCTCCTCGTCGGCGCCGCCATGAGCACGCGTGACGACGACAAGGAGCGTCTGCGGTTGTTGGTGCAGTCGGGCGTCGACGTCGTCGTGCTCGACTCGTCGCAGGGCAACTCGCACTTCCAGATCGAGATGATTCGCTTCATCAAGGCGACCTATCCCGAGCTGCAGGTCATCGCTGGCAACGTGGTGACGCGCGCGCAAGCCAAAAACCTCATCGACGCCGGTTGCGACGGTCTGCGTGTCGGCATGGGCTGCGGCTCCATCTGCATCACGCAGGAGGTGATGGCGTGCGGGTGTCCGCAGGCGACCGCCGTCCACCAGGTGTCGTCCTACGCGCGCCACTTCGGCGTGCCGATCATCGCCGACGGCGGAATCCAGAACATCGGACATATCATGAAGGCGCTCAGTCTCGGCGCCTCGACCGTCATGATGGGCTCGCTGCTCGCCGGCACCAGCGAGGCGCCCGGCGACTACTTCTTCTCGGAGGGCGTGCGCCTGAAGAAGTACCGGGGGATGGGCAGCCTCGAGGCGATGGAGCGCAAGGATGCGAAGGGCGCGGCCATGTCGCGCTACTATCACAACGAGATGGACAAGTTGCGCGTCGCACAGGGTGTCTCGGGCAACATCGTCGACAAGGGCTCCGTGTTGCGCTTCTTGCCCTACCTCGAGTGCGGGCTGCAGCACAGCTGCCAGGACATTGGCGCGCGATCGCTGTCGCACCTCAACGAGAAGATTTACTCGGGCGAGTTGCGCTTCATGCGGCGAACGCACTCGGCTCAGGTGGAGGGCAACGTCCACAGCCTGTTTTCCTACGAGAAGCGGCTTTTC
Protein: 520 (aa)
MNSHSAKTVNGIATEKLLDGLSIDELFERGDGLAYNDFLLLPGYIDFTADEVDLSSPLTKKLTLKAPLVSSPMDTVTEADMAIAMALCGGIGIIHHNCTPEYQANEVLKVKKYKHGFIRDPMVMSPHNTVADVLEAKRKNGFTGYPITENGKLGGKLVGIVTSRDIDFREKDVDLRLEDVMTRLDDMVTAKQGIKLQQANEILEKSKKGKLPIINQNGELVALIARTDLKKARSYPNASKDSNKQLLVGAAMSTRDDDKERLRLLVQSGVDVVVLDSSQGNSHFQIEMIRFIKATYPELQVIAGNVVTRAQAKNLIDAGCDGLRVGMGCGSICITQEVMACGCPQATAVHQVSSYARHFGVPIIADGGIQNIGHIMKALSLGASTVMMGSLLAGTSEAPGDYFFSEGVRLKKYRGMGSLEAMERKDAKGAAMSRYYHNEMDKLRVAQGVSGNIVDKGSVLRFLPYLECGLQHSCQDIGARSLSHLNEKIYSGELRFMRRTHSAQVEGNVHSLFSYEKRLF
| Type | Start | End | Length |
| CDS |
49226 |
49332 |
107 |
| CDS |
49507 |
49657 |
151 |
| CDS |
49959 |
51260 |
1302 |
| intron |
49333 |
49506 |
174 |
| intron |
49658 |
49958 |
301 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653775 |
inosine-5-monophosphate dehydrogenase [Aedes aegypti] gb|EAT38872.1| inosine-5-monophosphate dehydrogenase [Aedes aegypti] |
0.0 |
| InterPro |
IPR018529 |
Inosine-5'-monophosphate dehydrogenase-related |
|
| InterPro |
IPR005990 |
Inosine-5'-monophosphate dehydrogenase |
|
| InterPro |
IPR013785 |
Aldolase-type TIM barrel |
|
| InterPro |
IPR001093 |
IMP dehydrogenase/GMP reductase |
|
| InterPro |
IPR000644 |
Cystathionine beta-synthase, core |
|
| InterPro |
IPR015875 |
IMP dehydrogenase / GMP reductase, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0003938 |
IMP dehydrogenase activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF01180.16 |
Dihydroorotate dehydrogenase |
0.043 |
| Pfam |
PF03060.10 |
Nitronate monooxygenase |
1.2e-12 |
| Pfam |
PF00571.23 |
CBS domain |
1.2e-17 |
| Pfam |
PF00977.16 |
Histidine biosynthesis protein |
4.4e-05 |
| Pfam |
PF04131.9 |
Putative N-acetylmannosamine-6-phosphate epimerase |
0.021 |
| Pfam |
PF00478.20 |
IMP dehydrogenase / GMP reductase domain |
2.3e-185 |
| Pfam |
PF02310.14 |
B12 binding domain |
0.039 |
| Pfam |
PF01070.13 |
FMN-dependent dehydrogenase |
8.5e-09 |
| Pfam |
PF05690.9 |
Thiazole biosynthesis protein ThiG |
0.00099 |
| Pfam |
PF01081.14 |
KDPG and KHG aldolase |
0.0014 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000321584 |
| H. sapiens |
ENSP00000419609 |
| M. musculus |
ENSMUSG00000003500 |
| H. sapiens |
ENSP00000393525 |
| H. sapiens |
ENSP00000420185 |
| D. plexippus |
DPOGS200734PA |
| H. sapiens |
ENSP00000345096 |
| N. vitripennis |
NV18927-PA |
| A. aegypti |
AAEL009273 |
| H. sapiens |
ENSP00000420803 |
| A. mellifera |
GB16346-PA |
| P. humanus |
PHUM147620-PA |
| A. gambiae |
AGAP011133 |
| H. sapiens |
ENSP00000399400 |
| T. castaneum |
TC005099 |
| S. invicta |
SI2.2.0_09897 |
| H. sapiens |
ENSP00000342438 |
| H. sapiens |
ENSP00000346219 |
| D. melanogaster |
FBgn0003204 |
| P. humanus |
PHUM097460-PA |
| P. vanderplanki |
Pv.15811 |
| H. sapiens |
ENSP00000367989 |
| C. quinquefasciatus |
CPIJ011687 |
| H. sapiens |
ENSP00000417296 |
| H. sapiens |
ENSP00000265385 |
| H. sapiens |
ENSP00000403502 |
| M. musculus |
ENSMUSG00000062867 |
| H. melpomene |
HMEL008955-PA |
| B. mori |
BGIBMGA001035-TA |
| S. invicta |
SI2.2.0_12802 |