MidgeBase gene description page [Pn.04154]
Outline
| Gene ID | Pn.04154 |
| Type | Protein coding gene |
| Scaffold | PnScaf3423 |
| Start | 41 |
| End | 13514 |
| Direction | + |
Sequence
Transcript: 8994 (bp)
ATGTGTTTCGCCATTCCAGATAACATCACGAATGTTTTACACGCAAAATGTGCGTGTCCCTACGGCGAACGTTTGAACGAGGACGAAAAATCATGTATGCTCGATCCGAGCGCAGAGCCACCAGTTCAGGCTTGTCCTAACTCGTGGGACTTTACGTGTCGAAATCAGCGCTGCATTCCGAAATCGTGGATCTGCGACGGCGATGACGACTGCTTGGACAACAGCGACGAAGAGCAGAATTGCACAAAACCGACTTGCGGATCGAACGAGTTTCAGTGCAAATCAGGCCGCTGTATTCCTCTAAACTTTCGATGCGATCAGGAGAATGATTGCGGAGATCACTCGGACGAGTTCGAGTGTGGAAATGTGACATGCGCCGCCTCGCAATTCGCCTGCGAAAACGGAAGATGCATTCCGAATATTTGGAAGTGCGACTCGGAAAACGATTGTGGTGACGGATCGGACGAGGGTGACTTTTGTGCTGAAAAGACTTGCGCCTACTTCCAGTTCACTTGTCCCCGAACAGGCCACTGTATTCCTCAGTCATGGGTGTGTGATGGCGACGACGATTGCTTCGATAAGCAAGATGAGAAAGATTGCCCGCCCATAACGTGCTCGGCGAATCAATTCAAGTGCGCGGATCTGCGGCAGTGTGTCGAAGAGAACTATAAGTGCGACGGCATTCCGGACTGTAATGACGGCTCGGACGAGCTTGGATGCCCGTCGGTGGAACCCAATCAGTGCAATCAGGAGAAGCACTTCCGCTGCAAAACGTCCGGTATTTGCATTCCGATTGCGTGGCACTGCGACGGCTCCAACGACTGTGAGGATCACTCGGATGAGCAGGAGTGCGGCTCAATTACATGCCCCAACAACTTCTTCAAATGCAAGAACGGAAAGTGCGTCTTCAAAGCCTACGTGTGCAACGGCGTGGACGACTGCGGCGACAACTCAGATGAGTCACATGAGCATGCCTGCGTGCCGCCACCGTTCAGATGCCCGATAGGACAATGGCAATGCCCGGGCGTTCACGAGAGATGCGTCAATCTTACATCCGTTTGCGACGGAAAGCCTGACTGTCCAAATGGTTCTGACGAGGGAGAGGGTTGTGACTTGGCCGAATGTCAGCACCAGAACGGCCGCTGCACGAACGGCTGCCAGAAAACACCGCTAGGAGCGTTATGCATTTGCCCTCCGGGCGAAGAACTCGCCGATGACGGCTTCACGTGCAAGGACATGAACGAGTGTGATCCGCCTGGACTGTGCTCTCAGAGGTGCGTCAACACGAAAGGCTCCTACTTCTGCTCATGCACGCCGGGCTACGACATTCTGCCCGATCACCATCACTGCAAGGCCGTCAATCACTCGGCCGCCTTTCTGATTATCTCGAACCGACATTCAATCCTCGTCGCCGACCTCAAAGAACAAGGCCTCGAGCGCGTGCCCATCATCGTTGAGAATGTTGTGGCGACGACGTCAAACATGCACACGGGCACGATTTTCTGGTCGGACATGAAGCTGAAGAAGATTTCACGCCTCGACCGAGGAACAGAGCCGCAGGACATTATCACGACCGGGCTTGATCTCGTTGAAGGCTTAGCTTACGATTGGATCGCGAAGAACATTTACTGGCTGGATAGCAAATTGAATACGATCGAGGTGGCGACCGAGAATGGAACGAACCGAATGGTGTTGGTGCGCGAAAACATCACGCAGCCGCGTGGAATGTGCCTCGACCCCACGCCAGGAAACCGTTGGCTATTTTGGAGCGACTGGGGCGAAAATCCACGCATCGAAAGAGTCGGCATGGACGGAACGCTGAGGGAGACGATCATCAGCAATAAGATCTATTGGCCGAACGGCCTCACGCTCGATATCGCAACCAAACGTATCTACTTCGCCGACTCGAAACTCGACTTCATCGACTTTTGCTACTATAATGGAACGGGTCGTCAGCAGGTCCTGGCCGGCAGTCATTATCTTCTACATCCGCACTCGCTATCGCTATTCGAGGACACGCTATACTGGACAGATCGACAGCTCAATCGGGTCCTATCTGCACACAAGTTCAAGGGCACCAATCAGACGGTTGTCTCACACCTCATTTCTCAGCCGCTCTCCATTCACGTCCATCACAAGGTTTTGCAGCCGATGGCTGAGAATCCGTGCGAGACGGCCGAGTACAAGTGTCAGCACATTTGCCTCCTAAGTCCGTCCGAAAAGAAGGGCTACGTGTGCAAGTGCCGTCCCGGCTACAAGCTGACCGGCCAAAATCAGTGGCGCTGCGTCGAGGAAGAAAATCCGTATCTGATGGTGCTCAAAGGTAATCAGATAATCGATGTGCCGCTAAGCAATGGAAACGCACGCGCCGGCTCGCTGAATCCCGTTATCGGTATCGACAACGGTATTGGCCTCGAGTACGACCGAAAGGGCGAGCAAATCTTTTGGTTACAGGGAAAGGAAGACGACGAGGAGAACTGCACAATTTATGTGACGCCCTACGGCGGAGGCAACAAAACTGAGTTCCTGCCCGACTCGGGAATCGTCGGTGCACCGTACGTGATTGCCTTCGACTGGATCGGAAAAATACTTTTCATTGGAAATCGACTGGCTAGCAACATCGAGGCGGTAAAGGTTGAGGGCAAGACTCGTTATCGCGCGATTATTTTGTCGAATAATGGTGAGCGGGAGTCGGTGGCGAAACCAAAGTCGATCGCTCTTGATCCCAGCGATGGGAAAATTTTCTGGACGGACGACGGCGGCTACGGCGTCCCGGCCAAGGTCGGTCGCGTAAACATGGACGGTTTGAATCCGACAATTCTCGTCGACATGATCGAAAACCCCGAGGCCATCACGGTGGACGTCGACAAGAAGTTTGTTTACTACAGCACGAGACACCCGCCTGGCATCCACTCCATGCGATACGATGGCACCGAGAAGAATCAAATCTTGAGCGAACAGAATGACATCGCGTATCCGAAGGCACTCGGCATTCTCGAGTCGCGACTCTACTATCTCGATCCGACCTACGAGAAAATCATCCGTGTCGACTTGCCGAGCGGCGACAACCCTAAAATTATCGTCGACAATGAAGCCGATCTGAAAAATATGATTGTGTTTAGGAAGCGCTCGATGTCGAATCATCCGTGCATGAGCCTCAACGGAGGATGCGAGCATTTTTGTTTGCCCGCCGAGGGAGGCTCGCGTACCTGCGCTTGCGGCATCGGATACAAGAAAGAGAATGAAATCTCGTGCTCGCCCTACAAATCCTTTGCCGTCGTGTCGCAGCTCGATGTCGCGCGCGGCTATTCACTGAAGGACAGCTCCGAAGCGATGGTGCCGATCGCGGGTCCAGGCCACCATATTCTCCACGTCGACGTCGTATACCGCGACCAGTGGATATACTGGGTGGAGTTCAATCGAGGCCACTGGAACGGCATCTTCAGGTCACGACCGAACGGCACAGAAATCCAGCATATCGTGAAGGACGGCATTGGAAGCAACGCAATAAGAGGACTCGCAATCGATTGGGTTGCGGGCAATCTTTATTTCACCAACGTCTTCCCCCACGAGAATTACGTCGAGGTTTGCTGGCTGGACGGCACGAACCGCAAGATTATCGTCAAAACCACGACAGATGCACCGCGCGAGCTCGCTGTTAATCCAATCAAGCGACTTCTCTACTGGATCGATTACGGGCAATATCCACGAATCGGAAAGTCCTATTTAGACGGCTCCAACTGGCAGCCGGTGGTGACATCGGGCATTTCAAATCCGCGTGATCTCACGGTCGACATGCTGACTCACGACGTGTACTGGGTGGACTCGAAGCTCGACATGATCCAGAAGATTTCGTATACGGGTGGCAATCGACAGGTGATCCGGAGAAACCTGCCGAACCCGATGGGCATCGCCATTCACGTGAACGACGTCTATTGGGTCGACCGAAATCTCATGACCGTTTTCAAGGCATCCAAATTTCCCGGCAACACCACCGTGCCCGACAAGCTACGCACAAATCTGCCGAAGCTCCGCGACATTGTTATCTACGATTCAAGCAACCAGCCGGCTGACGAAAACAATCCCTGCTACAAACTCGGCAACGGTGGTTGCGATCAACTCTGCTTCAGCTTCCCGCCCGACACCTCCTCGATCGGGCGGCTTAGCTTCAAGTGCGACTGTGCAACCGGCAAGCTTGCGTCGGACGGTCGCCGGTGCGACACCGAAAACGAATTTCTCGTCTTTACGACCCGAACTGAGATACGTGCAATCGAACTCGACCCGAAGTCTACAAACGTTCCCTTCAAACCTGTCACGAATCTCACGAACGTCGTCGGCCTAGACTTTGATTACAACGACAACAAACTGTTCTTCACACAAATCCGACCGTGGTCGAAAATCGGCTGGATTAATGCCGACATACCAGAATCGAGCGCTATTAACACGATAATTAATCGCGGTATCAATCCCGAGGGAATCGCTTACGACTGGACGCAGAAGAAAATCTACTGGACGGACAGCGCGAACGTTTCCATTTTCGCAATGAATCTCGACGGCTCTGACCTCGTGATGATTTCGCGAGTCGAGCGGCCGCGTGCCATAGTACTGGACCCGTGCAATGGAACGCTCTACTACACCGATTGGGGACGATTCGGAACGACGGGAAAGATTTTCCGAACGACGATGGCCGGCTCGCTCAAGAAGGCCATTATCGACAAGGACTTGTCACAGCCGAGTGGTTTAGCCATCGACTACGAGGAGCGGATGCTGTATTGGACGGACGCGGTGCGTGAAAAGATCGAAAGGTCGACGCTGGACGGAAAGAATCGTGAGATTCTCGTCACGGCGACTATCTATCCGTTCGCCATCACCGTCTTCCGGAACTACATTTACTGGACCGATCTGCAGTTACGCGGCGTTTATCGGGCTGAAAAGCACACCGGCGCTAACATGATCGAGATGGTCAAACGGCTGGAGGATTCGCCCCGCGATATCCACATCTACAGCAAGTCGCGGCAGTCATGCCAAGCGAACCCGTGCAATCAAAACAATGGTGGATGTGCTCAGAGCTGCCATCCAGGTTTAAATGGAAAGGCTGAGTGCAAGTGTGACGACTCCACCAAACCCGTCAACGAGGGCAGAATGTGCGCACCGAAAAACCACACGTGCGATGCCAGCAAGTTCTACTGTAAGAACGGAAAGTGCATTTCAAGGATGTGGGCCTGCGATGGAGACAATGATTGCGGTGACAACTCAGACGAAGACACCAACTACTGCGCCTTCCACTCATGTTCACCTAACGAGTTCCGCTGCAACAACGGCCGATGCATTTTCAAGACCTGGAAATGTGACCACGAAAACGACTGCAAGGACGGATCAGACGAAATCAATTGCCAGTATCCGCCTTGCGCTGACGGAGAGTTCACTTGTCTCAACGGCCGTTGCATTCCGCAAGCTCAAGTCTGTAACGGCGTTAACGATTGCAAAGACAATGCGACCTCGGACGAGACCCACGAGCGATGCCCGACCAACACCACCTGTCCGCCAAATCATCTCAAGTGTGAGAAAACAAACATCTGCGTTGAACCGTATTGGCTTTGCGATGGTGACAATGACTGCGGCGACAACTCAGACGAAGACGCCATCCACTGTGCCCAAAGAACATGTCCTCAGAACTCGTTCAGATGCCCCAACCATCGCTGCATTCCGGCCACTTGGTACTGTGACGGAGACGACGACTGCGGAGACAGTGCCGATGAGCCGCCAGAATATTGCAAGTCTGAAGGCAGAACGTGCTTCGGAGATCTCTTCACATGCGACAATGGCAATTGCATTCCGCGAATTTATATTTGTGATGGAGACAATGATTGTCTTGACAATAGCGACGAGGACAACAGGCATCAGTGTAACGACCGAAAGTGTGATCCCGAGACGGAGTTTACGTGCGAGGAGAATAAGCAATGGGGAAGGTCGCAATGCATTCCAAAGAAATGGCTTTGCGACGGCGACCCAGATTGTGTCGATGGTGCCGACGAGAATACAACGCTGCACAACTGTCCAACGCCACAGCCTTGCTCGGAAGATCAGTTCACGTGCGACAATGGCAGGTGCATCAACAAGGGTTGGCTGTGCGATCACGACAACGATTGCGGCGACGGCTCGGACGAAGGAAAGTTCTGCAACTCGCAGTATAAGACATGCTCACCACAGGAATTCACCTGTCAAAATTTCAAGTGCATCAGAAATCAATATCGTTGCGACGGCGAAGATGATTGCGGCGACCGGTCGGACGAAGTCGACTGCAAAAAGGATAACACGACGTGTGCGAAAGGTAAATTTCAGTGCAACAACGGAAATTGCATTGACTACACACTCGTGTGCAACAAAGTCTCGGACTGCTCAGACGACTCGGACGAGCCGTTGCACTGTAATGTTGACGAGTGCGCGAAGGTCGAAATAAATCAGTGCGGACACAAATGTGTGGATACTCTCACGAGCTATTATTGCGATTGTAATCAGGGCTACAAATTGCTTGCTGATGGAAAGGCCTGTGCCGACATTGACGAGTGTCTCGAGACGCCAGGTGTTTGTTCGCAGCACTGCTCGAACACGCCAGGCGGCTATTACTGCAAGTGCGACGAGAGATACTACGAGCGCCAGAATGACGAGCACACATGTAAGCGCAAGGACAAGGAAACGCCGTGGATTATCTTCACAAACAAATACTACGTGCGTAACATATCGACAGACGGCTCCATTTACAATGTCGTGCATCAGGATCTGATGAACGTCGTTGCCGTTGATTTCGACTACAAGGACCAGAAAATGTATTTCTGTGACGTCACCGCCAAGACGATCTTCCGCTCGGACTATGGCAGCGACACTGAGGCCAAAATTCCCAAGGAGCCCGTCATCAAACACGACTCGCATGGCCTGGAAGGACTGGCCGTTGACTGGATCGGCCGCAAACTCTATTGGCTCGATCGGCACTCTAAGAATCTGGATGTGTCCGAGCTGGATGGCACAAACAGAAAAACTTTGAGAAGCGGCGTCGTTGATCCGCGTGCCGTTGTCGTTCATCCGGGCATCGGTTACTTGTACTTCTCCTCGTGGCACCTGCAAGCCTACATCGCAAAAATGGGCATGGACGGCTCCAACTTCAGCCGCATTCTGACGTGGGAGCAAGACATTGCGTGGCCGAACGCCCTCACGATCGATTACTTCACCGATCGCATCTACTGGGCCGACGCTCACTTGGATTACATCGCCTTCACCGATTTAGAGGGCCGAAGCCGTCACGTGGTGCTTTCGGGCGCAAAGGTCCCGCACGTCTTTGCACTCTCCGTTTTCGACGACTTCCTCTACTGGACCGATTGGAATCTGAAGGCGATTATGCGCGCGAACAAGTTCACCGGAAAGAACCTGCAAACGCTACGAAACACAACCCATCGGCCCTATGGCATTCACATAAATCACCGTCTGCGACAAATTCCGTATCCGAACCCGTGCGGCGAGACGAATGGAGGTTGCAGCCATCTGTGTCTTCTGTCGCCGCCGCTCGAGTCGACCTACCTGAACATCGAGGGTTACATCGAAGAAGGAGCGCCCGGCTACAAGTGTGCGTGTCCGAACCAATTCTATCTCGCTCGAGACGGAAAGACCTGTATTGCAAACTGCACGGCCGGTCAGCACAGATGCGGCGGAAGCGACGAAAAATGCATTCCATGGTTCTGGAAGTGTGACGGAGAGCCCGACTGCAAAGACAAATCGGACGAACCATCTTCGTGTTCTCCGCGTCACTGTCGTGCCGGAACATTCCAGTGCAAAAACAACAACTGCACACCATCGGCAACTATTTGCGACGGTAACGATGACTGCGGCGACGGAAGTGACGAGCAAAACTGCGATCTGCCTTGTCCAGAGAGTGACTTCAAGTGCAAGTCAAGTGGTCGCTGCATTCTTGAGAGCTGGAGGTGTGATGGAGACGCTGACTGCAGCGATGGAAGCGACGAAGATCCAGCCGTGTGTCACAAACGTGCGTGCGATCCTGAGACTGAGTTCAGTTGTAAAAATGGTCGTTGCATTCCGAAGTTGTGGATGTGCGACTTTGATAACGATTGCGGAGATGACTCAGACGAGCCGGCCTATATGTGTCGCCAAAGAAATTGCACGACTGGCTGGCGCCGATGTCCTGGTCAATCCAACTACCGTTGCATCCCCAAATGGCTCTTCTGCGACGGAAAAGACGACTGTCGTGACAATAGTGACGAGCTTCCTGAAAACTGTCCGACATGTCAGGCGGACACTGACTTTAAATGCAAAAACAATCGCTGCATCCCCAAGCAATGGACATGCGATTTCGCTGATGACTGCGGTGATGGATCTGACGAGGCCGAGACCCTTTGCAAGGGTCGCTATCGAGACTGCTCAGAGTCTGAATTCCATTGCGACAATGGAAAATGTATTTCATCGCGATGGCGCTGTGACCATGAGGACGATTGCGGTGACGGTTCTGATGAGCTCCATTGCGAGGGCTTCCAATGCAAGAACGGAACGTTCCAGTGTAAGTCCGGTCACTGCATTGCTAACTACTTCCGCTGTGATGGCGACCGCGATTGTCGAGACATGTCGGACGAAATTGGCTGTCCTCCAAAATACCCCGGCGGAAGGTATTGTCCGGAGACGAGATTCCAGTGCAATAATAACTTCTGCGTTTTCAACACTGACGTTTGCGATGGAGCAGACGACTGCGGCGATAACTCTGACGAGGCGCCTTCTGTGTGCTCAAACTTAACCTGCGATTTAACCAAGAAATTCCAATGTGACAACAAAAAATGTATTCCTCGCTTCCAAATATGTGATGGCATAGACAACTGTGGAGACGGATCCGATGAAAATAATCACACACTTTGCAGCACTCGAATCAAGCCGTGTGACCCTGTCACTCAATTCACGTGCGCCAATAAGAAGTGCGTTGAGAGGTCGCAAGTTTGG
Protein: 2998 (aa)
MCFAIPDNITNVLHAKCACPYGERLNEDEKSCMLDPSAEPPVQACPNSWDFTCRNQRCIPKSWICDGDDDCLDNSDEEQNCTKPTCGSNEFQCKSGRCIPLNFRCDQENDCGDHSDEFECGNVTCAASQFACENGRCIPNIWKCDSENDCGDGSDEGDFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCSANQFKCADLRQCVEENYKCDGIPDCNDGSDELGCPSVEPNQCNQEKHFRCKTSGICIPIAWHCDGSNDCEDHSDEQECGSITCPNNFFKCKNGKCVFKAYVCNGVDDCGDNSDESHEHACVPPPFRCPIGQWQCPGVHERCVNLTSVCDGKPDCPNGSDEGEGCDLAECQHQNGRCTNGCQKTPLGALCICPPGEELADDGFTCKDMNECDPPGLCSQRCVNTKGSYFCSCTPGYDILPDHHHCKAVNHSAAFLIISNRHSILVADLKEQGLERVPIIVENVVATTSNMHTGTIFWSDMKLKKISRLDRGTEPQDIITTGLDLVEGLAYDWIAKNIYWLDSKLNTIEVATENGTNRMVLVRENITQPRGMCLDPTPGNRWLFWSDWGENPRIERVGMDGTLRETIISNKIYWPNGLTLDIATKRIYFADSKLDFIDFCYYNGTGRQQVLAGSHYLLHPHSLSLFEDTLYWTDRQLNRVLSAHKFKGTNQTVVSHLISQPLSIHVHHKVLQPMAENPCETAEYKCQHICLLSPSEKKGYVCKCRPGYKLTGQNQWRCVEEENPYLMVLKGNQIIDVPLSNGNARAGSLNPVIGIDNGIGLEYDRKGEQIFWLQGKEDDEENCTIYVTPYGGGNKTEFLPDSGIVGAPYVIAFDWIGKILFIGNRLASNIEAVKVEGKTRYRAIILSNNGERESVAKPKSIALDPSDGKIFWTDDGGYGVPAKVGRVNMDGLNPTILVDMIENPEAITVDVDKKFVYYSTRHPPGIHSMRYDGTEKNQILSEQNDIAYPKALGILESRLYYLDPTYEKIIRVDLPSGDNPKIIVDNEADLKNMIVFRKRSMSNHPCMSLNGGCEHFCLPAEGGSRTCACGIGYKKENEISCSPYKSFAVVSQLDVARGYSLKDSSEAMVPIAGPGHHILHVDVVYRDQWIYWVEFNRGHWNGIFRSRPNGTEIQHIVKDGIGSNAIRGLAIDWVAGNLYFTNVFPHENYVEVCWLDGTNRKIIVKTTTDAPRELAVNPIKRLLYWIDYGQYPRIGKSYLDGSNWQPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKISYTGGNRQVIRRNLPNPMGIAIHVNDVYWVDRNLMTVFKASKFPGNTTVPDKLRTNLPKLRDIVIYDSSNQPADENNPCYKLGNGGCDQLCFSFPPDTSSIGRLSFKCDCATGKLASDGRRCDTENEFLVFTTRTEIRAIELDPKSTNVPFKPVTNLTNVVGLDFDYNDNKLFFTQIRPWSKIGWINADIPESSAINTIINRGINPEGIAYDWTQKKIYWTDSANVSIFAMNLDGSDLVMISRVERPRAIVLDPCNGTLYYTDWGRFGTTGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEERMLYWTDAVREKIERSTLDGKNREILVTATIYPFAITVFRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHIYSKSRQSCQANPCNQNNGGCAQSCHPGLNGKAECKCDDSTKPVNEGRMCAPKNHTCDASKFYCKNGKCISRMWACDGDNDCGDNSDEDTNYCAFHSCSPNEFRCNNGRCIFKTWKCDHENDCKDGSDEINCQYPPCADGEFTCLNGRCIPQAQVCNGVNDCKDNATSDETHERCPTNTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEDAIHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCGDSADEPPEYCKSEGRTCFGDLFTCDNGNCIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDPETEFTCEENKQWGRSQCIPKKWLCDGDPDCVDGADENTTLHNCPTPQPCSEDQFTCDNGRCINKGWLCDHDNDCGDGSDEGKFCNSQYKTCSPQEFTCQNFKCIRNQYRCDGEDDCGDRSDEVDCKKDNTTCAKGKFQCNNGNCIDYTLVCNKVSDCSDDSDEPLHCNVDECAKVEINQCGHKCVDTLTSYYCDCNQGYKLLADGKACADIDECLETPGVCSQHCSNTPGGYYCKCDERYYERQNDEHTCKRKDKETPWIIFTNKYYVRNISTDGSIYNVVHQDLMNVVAVDFDYKDQKMYFCDVTAKTIFRSDYGSDTEAKIPKEPVIKHDSHGLEGLAVDWIGRKLYWLDRHSKNLDVSELDGTNRKTLRSGVVDPRAVVVHPGIGYLYFSSWHLQAYIAKMGMDGSNFSRILTWEQDIAWPNALTIDYFTDRIYWADAHLDYIAFTDLEGRSRHVVLSGAKVPHVFALSVFDDFLYWTDWNLKAIMRANKFTGKNLQTLRNTTHRPYGIHINHRLRQIPYPNPCGETNGGCSHLCLLSPPLESTYLNIEGYIEEGAPGYKCACPNQFYLARDGKTCIANCTAGQHRCGGSDEKCIPWFWKCDGEPDCKDKSDEPSSCSPRHCRAGTFQCKNNNCTPSATICDGNDDCGDGSDEQNCDLPCPESDFKCKSSGRCILESWRCDGDADCSDGSDEDPAVCHKRACDPETEFSCKNGRCIPKLWMCDFDNDCGDDSDEPAYMCRQRNCTTGWRRCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPTCQADTDFKCKNNRCIPKQWTCDFADDCGDGSDEAETLCKGRYRDCSESEFHCDNGKCISSRWRCDHEDDCGDGSDELHCEGFQCKNGTFQCKSGHCIANYFRCDGDRDCRDMSDEIGCPPKYPGGRYCPETRFQCNNNFCVFNTDVCDGADDCGDNSDEAPSVCSNLTCDLTKKFQCDNKKCIPRFQICDGIDNCGDGSDENNHTLCSTRIKPCDPVTQFTCANKKCVERSQVW
| Type | Start | End | Length |
| CDS |
41 |
287 |
247 |
| CDS |
632 |
943 |
312 |
| CDS |
1787 |
2407 |
621 |
| CDS |
2999 |
5264 |
2266 |
| CDS |
5316 |
7095 |
1780 |
| CDS |
7280 |
7659 |
380 |
| CDS |
7718 |
7828 |
111 |
| CDS |
8096 |
8229 |
134 |
| CDS |
8293 |
8700 |
408 |
| CDS |
9391 |
10869 |
1479 |
| CDS |
10932 |
11054 |
123 |
| CDS |
11232 |
11399 |
168 |
| CDS |
11513 |
11839 |
327 |
| CDS |
12049 |
12177 |
129 |
| CDS |
12848 |
13220 |
373 |
| CDS |
13376 |
13511 |
136 |
| intron |
288 |
631 |
344 |
| intron |
944 |
1786 |
843 |
| intron |
2408 |
2998 |
591 |
| intron |
5265 |
5315 |
51 |
| intron |
7096 |
7279 |
184 |
| intron |
7660 |
7717 |
58 |
| intron |
7829 |
8095 |
267 |
| intron |
8230 |
8292 |
63 |
| intron |
8701 |
9390 |
690 |
| intron |
10870 |
10931 |
62 |
| intron |
11055 |
11231 |
177 |
| intron |
11400 |
11512 |
113 |
| intron |
11840 |
12048 |
209 |
| intron |
12178 |
12847 |
670 |
| intron |
13221 |
13375 |
155 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660469 |
low-density lipoprotein receptor (ldl) [Aedes aegypti] gb|EAT38205.1| low-density lipoprotein receptor (ldl) [Aedes aegypti] |
0.0 |
| InterPro |
IPR002172 |
Low-density lipoprotein (LDL) receptor class A repeat |
|
| InterPro |
IPR000033 |
LDLR class B repeat |
|
| InterPro |
IPR001881 |
EGF-like calcium-binding |
|
| InterPro |
IPR023415 |
Low-density lipoprotein (LDL) receptor class A, conserved site |
|
| InterPro |
IPR000742 |
Epidermal growth factor-like domain |
|
| InterPro |
IPR011042 |
Six-bladed beta-propeller, TolB-like |
|
| InterPro |
IPR009030 |
Growth factor, receptor |
|
| InterPro |
IPR013032 |
EGF-like, conserved site |
|
| InterPro |
IPR000152 |
EGF-type aspartate/asparagine hydroxylation site |
|
| InterPro |
IPR018097 |
EGF-like calcium-binding, conserved site |
|
| InterPro |
IPR006210 |
Epidermal growth factor-like |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0005509 |
calcium ion binding |
|
| Pfam |
PF01731.15 |
Arylesterase |
1.9e-08 |
| Pfam |
PF00058.12 |
Low-density lipoprotein receptor repeat class B |
2.3e-97 |
| Pfam |
PF00008.22 |
EGF-like domain |
0.0034 |
| Pfam |
PF00057.13 |
Low-density lipoprotein receptor domain class A |
9.5e-265 |
| Pfam |
PF08450.7 |
SMP-30/Gluconolaconase/LRE-like region |
1.5e-09 |
| Pfam |
PF10282.4 |
Lactonase, 7-bladed beta-propeller |
1.3 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13045 |
| Pn.05082 |
| Pn.12040 |
| Pn.06251 |
| Pn.02862 |
| Pn.03056 |
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC007146 |
| P. humanus |
PHUM038270-PA |
| A. gambiae |
AGAP000331 |
| S. invicta |
SI2.2.0_80786 |
| T. castaneum |
TC004042 |
| P. vanderplanki |
Pv.04554 |
| M. musculus |
ENSMUSG00000027070 |
| H. sapiens |
ENSP00000436652 |
| D. melanogaster |
FBgn0004649 |
| M. musculus |
ENSMUSG00000024913 |
| C. quinquefasciatus |
CPIJ020278 |
| H. sapiens |
ENSP00000294304 |
| H. sapiens |
ENSP00000261349 |
| B. mori |
BGIBMGA001048-TA |
| D. melanogaster |
FBgn0030706 |
| H. sapiens |
ENSP00000445083 |
| D. plexippus |
DPOGS211883PA |
| P. humanus |
PHUM449100-PA |
| P. vanderplanki |
Pv.13645 |
| H. melpomene |
HMEL010093-PA |
| N. vitripennis |
NV12504-PA |
| C. quinquefasciatus |
CPIJ000808 |
| H. sapiens |
ENSP00000243077 |
| A. gambiae |
AGAP000427 |
| A. aegypti |
AAEL009806 |
| H. sapiens |
ENSP00000393859 |
| T. castaneum |
TC004414 |
| T. castaneum |
TC004260 |
| N. vitripennis |
NV13371-PA |
| H. sapiens |
ENSP00000367888 |
| T. castaneum |
TC009548 |
| S. invicta |
SI2.2.0_04586 |
| M. musculus |
ENSMUSG00000030201 |
| A. mellifera |
GB16571-PA |
| H. sapiens |
ENSP00000374135 |
| A. aegypti |
AAEL014222 |
| P. vanderplanki |
Pv.08374 |
| H. sapiens |
ENSP00000451737 |
| P. humanus |
PHUM507180-PA |
| B. mori |
BGIBMGA001256-TA |
| H. melpomene |
HMEL005758-PA |
| B. mori |
BGIBMGA011982-TA |
| H. melpomene |
HMEL016558-PA |
| P. vanderplanki |
Pv.06511 |
| T. castaneum |
TC008596 |
| D. plexippus |
DPOGS200714PA |
| D. melanogaster |
FBgn0053087 |
| T. castaneum |
TC008151 |
| H. sapiens |
ENSP00000409813 |
| A. aegypti |
AAEL010712 |
| H. melpomene |
HMEL005166-PA |
| H. sapiens |
ENSP00000451449 |
| H. sapiens |
ENSP00000341264 |
| D. plexippus |
DPOGS203530PA |
| A. aegypti |
AAEL009869 |
| B. mori |
BGIBMGA014161-TA |
| N. vitripennis |
NV50398-PA |
| A. aegypti |
AAEL007041 |
| B. mori |
BGIBMGA009172-TA |
| A. mellifera |
GB12775-PA |
| D. plexippus |
DPOGS210344PA |
| M. musculus |
ENSMUSG00000027253 |
| C. quinquefasciatus |
CPIJ014519 |
| H. sapiens |
ENSP00000442472 |
| M. musculus |
ENSMUSG00000049252 |
| C. quinquefasciatus |
CPIJ017507 |
| P. humanus |
PHUM470230-PA |
| D. plexippus |
DPOGS216174PA |
| D. melanogaster |
FBgn0261260 |
| D. melanogaster |
FBgn0000119 |
| H. sapiens |
ENSP00000415052 |
| C. quinquefasciatus |
CPIJ004220 |
| H. sapiens |
ENSP00000413239 |
| P. humanus |
PHUM086410-PA |
| N. vitripennis |
NV14309-PA |
| H. sapiens |
ENSP00000263816 |
| A. mellifera |
GB11226-PA |
| S. invicta |
SI2.2.0_16473 |
| A. gambiae |
AGAP012372 |
| A. aegypti |
AAEL007657 |
| D. plexippus |
DPOGS203529PA |
| H. melpomene |
HMEL006767-PA |
| A. gambiae |
AGAP000037 |
| A. gambiae |
AGAP011770 |