MidgeBase gene description page [Pn.04133]
Outline
| Gene ID | Pn.04133 |
| Type | Protein coding gene |
| Scaffold | PnScaf3392 |
| Start | 3657 |
| End | 5143 |
| Direction | - |
Sequence
Transcript: 933 (bp)
ATGCACAGAGCGCAGAGCACTAATTCCGCGCCCCTCCTCCCTTTGCAGTCACCCGTGGGCCAAGTGGAGCAGGCCGTCAAGGACGCCATCGACGCCGGCTACCGGCACATCGACTGCGCCTTCGTCTACGGCAACGAGAACGAGGTCGGCAACGCGATCGCCGCCAAAATCGCCGACGGCGTCGTCAAGCGCGACGAGCTCTTCGTCACGTCGAAGCTCTGGAACGTTTTCCACGATCCGAAGCACGTGCGCGGCGCCGTCGAGAAGTCGCTGCGGCTGCTGAAGGTCGACTATCTCGACCTGTACTTGATCCACTGGCCGATGGGCTACGCGCACCTCAACGACGGCAACACGCTCTTCCCCAAGACCGACAACGACGAGTGGATCTTCTCGGACGACGACTACGTGGACACGTGGCGCGGTCTTGAGGAGGTCGTCGACGCCGGCCTCGTCAAGTCCATCGGACTCAGCAACTTCAACTCGCAACAAATCGAGCGCGTGCTGGCAGTGGCGAGGATAAAGCCGGCAATGCTGCAGGTGGAGTCGCATCCCTATCTCAACCAGAAGAAGCTCATCGAGTTTTGTGAGAGCAAGGGAATCGCTGTGACTGCATACTCACCGCTTGGGTCGAATGATCGGCCTTGGGCAAAGCCTGGCGACCCCCAGCTGATGGACGACCCGCGCATCGTGAAGCTGGCCGAAAAGTACGCGAAAACACCCGCGCAGATTCTCATCCGCTACCAAATCCAGCGCGGCGTCGTCGTCATCCCCAAGTCGGTCACGAAGTCGCGAATCATCAGCAACTTTGACGTCTTCAACTTCGAGCTGAGCGCCGACGACGTGGAGTCCATCGACGGCATCGACTGCGGCGGCCGCTTGTGCTCGCTGTCGTGGGTTTCGCATCATCCTCACTACCCGTTTGCGGCTGAGTTT
Protein: 311 (aa)
MHRAQSTNSAPLLPLQSPVGQVEQAVKDAIDAGYRHIDCAFVYGNENEVGNAIAAKIADGVVKRDELFVTSKLWNVFHDPKHVRGAVEKSLRLLKVDYLDLYLIHWPMGYAHLNDGNTLFPKTDNDEWIFSDDDYVDTWRGLEEVVDAGLVKSIGLSNFNSQQIERVLAVARIKPAMLQVESHPYLNQKKLIEFCESKGIAVTAYSPLGSNDRPWAKPGDPQLMDDPRIVKLAEKYAKTPAQILIRYQIQRGVVVIPKSVTKSRIISNFDVFNFELSADDVESIDGIDCGGRLCSLSWVSHHPHYPFAAEF
| Type | Start | End | Length |
| CDS |
3660 |
3699 |
40 |
| CDS |
3769 |
4015 |
247 |
| CDS |
4108 |
4268 |
161 |
| CDS |
4659 |
5143 |
485 |
| intron |
3700 |
3768 |
69 |
| intron |
4016 |
4107 |
92 |
| intron |
4269 |
4658 |
390 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADD20387 |
aldo-keto reductase [Glossina morsitans morsitans] |
1e-111 |
| InterPro |
IPR001395 |
Aldo/keto reductase |
|
| InterPro |
IPR020471 |
Aldo/keto reductase subgroup |
|
| InterPro |
IPR018170 |
Aldo/keto reductase, conserved site |
|
| InterPro |
IPR023210 |
NADP-dependent oxidoreductase domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00248.16 |
Aldo/keto reductase family |
1.5e-56 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000285930 |
| B. mori |
BGIBMGA012152-TA |
| B. mori |
BGIBMGA014453-TA |
| A. mellifera |
GB18109-PA |
| D. melanogaster |
FBgn0086254 |
| A. aegypti |
AAEL004088 |
| H. sapiens |
ENSP00000389289 |
| D. plexippus |
DPOGS215024PA |
| A. gambiae |
AGAP011050 |
| H. sapiens |
ENSP00000352584 |
| T. castaneum |
TC004510 |
| P. humanus |
PHUM335220-PA |
| M. musculus |
ENSMUSG00000052131 |
| H. sapiens |
ENSP00000414399 |
| T. castaneum |
TC004878 |
| S. invicta |
SI2.2.0_07982 |
| M. musculus |
ENSMUSG00000001642 |
| H. sapiens |
ENSP00000397009 |
| M. musculus |
ENSMUSG00000029762 |
| P. vanderplanki |
Pv.06071 |
| C. quinquefasciatus |
CPIJ003391 |
| H. melpomene |
HMEL014821-PA |
| T. castaneum |
TC004879 |
| P. humanus |
PHUM282300-PA |